| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004494 |
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| Symbol | |
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| ID | 8558262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3218539 |
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| End bp | 3219903 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407623 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D- alanyl ligase |
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| Protein accession | YP_003287117 |
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| Protein GI | 262395263 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAG TAACGTTATC TCAAATTGCC AACATCACTC GCGGTGAGCT ATTCGGCGAT
GATCTACTTA TCGACGCGGT TTCTACTGAT ACACGAGCGA TTGACAACGG TGCTTTATTT
GTTGCGCTGG TGGGTGAGCG CTTTGATGCG CATAACTTTT GCCAACAAGC GGTGGATGCA
GGCGCAGGTG CTTTACTCGT ACAAAAACAT CTAGATGTGA ATGTGCCACA AGTCGTGGTG
TCGGACACCA AAATGGCACT GGGTGAGTTA GCCTCTTGGG TGCATCAAAC TTGCCAAACA
CCTACCGTTG CCATCACAGG CAGTTGTGGT AAAACGACCG TCAAAGAAAT GGTCGCGAGC
ATTCTGCAAT TGAAAGGCAA AGTGCTGTTT ACTGCAGGTA ACTTCAATAA TGATATTGGT
GTTCCGTTGA CGTTATTGCG CTCACAGCAG GATGACGACT ATGCCGTGAT TGAGCTTGGT
GCTAATCATA TCGGTGAAAT TGCTTACACA ACGCAGTTAG TAAAACCAGA TATCGCGTTA
GTGAATAATG TAGCCGCTGC GCACCTTGAA GGCTTTGGTT CTATTGATGG CGTGAAACAA
GCCAAAGGTG AAATTTACCA AGGTCTTGCT GCAGGTAGTA TTGCGATTGT CAATTTAGAC
AGCAGTGGCG AAACAAAGTG GGAAAGCGTG CTGGCGGATA AGGAAGTTAT CACCTTCTCA
CAAAGTAATT CTGCGGCTGA TTACTATGCA TCAAATATCG TGATGAATGC CGCGGGAGAG
GCCAGCTTTA ACCTACATAT CGCAGCAAGC TCACAAGAAA TTGAACTGTC TCTGGGTATT
ATAGGTCAAC ACAACGTGGC GAATGCAATC GCAGCTTCTA TTATTGCGTT ACAAATGGGC
GCCACATTAG AAGAGGTTCG CGCTGGCCTT AAACATTTAA ACAAAGTGAA AGGTCGCGTC
GAGGTTGAAG CGCTGAGCGA AAAAATCAAA TTGATTGATG ACAGCTACAA CGCAAGCGTG
CCAGCCATGA AAGCGGCGGT TGACTTATTG GCTGCTTTCC CAGGTCAGCG CTGGCTGATT
TTAGGTAATA TGGCGGAATT GGGCGAGGAA AGTCTTGCAC TTCATCGTCA AGTCGGGGAA
TATGCTGCCC CACAAAAATT TGAACATGTT CTCACATATG GTGCAGACGC CAAGGTGATC
AGTGAGCTTT GCCAAGGCAT TCATTTTGAG ACGCACCAAG AGATGATTGA ATACATCAAG
CAGCATCTAG ACCAAGCCGT TCCTGAAAAC CATACGATTT TGGTGAAAGG AGCGAACGGT
GCACGTATGT TTGAAGTCGC TGCTGCTTTG AAGGAGTATT ATTAA
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| Protein sequence | MIKVTLSQIA NITRGELFGD DLLIDAVSTD TRAIDNGALF VALVGERFDA HNFCQQAVDA
GAGALLVQKH LDVNVPQVVV SDTKMALGEL ASWVHQTCQT PTVAITGSCG KTTVKEMVAS
ILQLKGKVLF TAGNFNNDIG VPLTLLRSQQ DDDYAVIELG ANHIGEIAYT TQLVKPDIAL
VNNVAAAHLE GFGSIDGVKQ AKGEIYQGLA AGSIAIVNLD SSGETKWESV LADKEVITFS
QSNSAADYYA SNIVMNAAGE ASFNLHIAAS SQEIELSLGI IGQHNVANAI AASIIALQMG
ATLEEVRAGL KHLNKVKGRV EVEALSEKIK LIDDSYNASV PAMKAAVDLL AAFPGQRWLI
LGNMAELGEE SLALHRQVGE YAAPQKFEHV LTYGADAKVI SELCQGIHFE THQEMIEYIK
QHLDQAVPEN HTILVKGANG ARMFEVAAAL KEYY
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