| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004489 |
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| Symbol | |
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| ID | 8558257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3212355 |
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| End bp | 3213812 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407618 |
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| Product | UDP-N-acetylmuramate--alanine ligase |
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| Protein accession | YP_003287112 |
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| Protein GI | 262395258 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0276736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATCC AACATACACA AGACTTAGCT CAGATTCGCG CCATGGTGCC AGAGATGCGC
CGCGTGAAAT CCATCCACTT CATCGGTATT GGTGGTGCGG GCATGAGCGG CATTGCAGAA
GTGCTGTTGA ATGAAGGCTA TCAAATCACG GGTTCTGACC TATCAGAAAA CCCTGTGACA
GAGCGTTTAG TATCAAAAGG TGCGACGGTA TTTATCGGGC ACCAAGCTAG CAATGTTGAA
AAAGCCAGTG TGGTTGTGGT TTCAACCGCT ATCAACGAAG AAAACCCAGA AGTGATAGCT
GCACGGGAGT TACGTATCCC TATTGTACGT CGTGCTGAGA TGCTCGCTGA GTTGATGCGC
TTCCGTCATG GTATTGCCGT TGCGGGCACG CACGGTAAAA CGACGACGAC GGCACTCGTG
ACACAAATTT ATTCTGAAGC AGGTCTTGAT CCAACGTTTG TAAACGGCGG CTTGGTGAAA
AGCGCAGGTA CAAATGCTCG TTTAGGCTCG AGTCGTATTC TAATTGCTGA GGCGGATGAG
AGCGACGCGT CATTCCTGCA CCTGCAACCA ATGGTAAGTA TCGTCACCAA TATTGAAGCC
GATCATATGG ATACTTATGG TGGTGACTTT GAAACGTTAA AGCAAACCTT CATTGATTTT
CTACACAATC TACCGTTCTA CGGCCAAGCT ATTGTTTGTA TTGATGATCC TGTGGTTCGA
GAGTTAATCC CACGTATTAG TCGTCAAGTG ATTACTTACG GTTTCTCCGA AGATGCTGAC
GTACGCATTG AAAACTATCG TCAAGAAGGT CAGCAAGGCA AATTTACGGT AGTACGTAAA
GGGCGTGCCA ACCTAGATAT CACTCTGAAC ATTCCAGGTC GTCACAATGC ACTTAATGCG
TCGGCTGCGA TTGCAGTGGC TACTGAAGAT GACATTGAAG ACGATGCAAT TCTAAAAGCA
ATGGCCGGTA CGCAAGGCAC GGGACGACGT TTTGATCACC TTGGCGAGTT TGATACTGGT
AATGGTCATG CCATGTTAGT GGATGATTAC GGACACCACC CAACAGAAGT TGATGTGACC
ATTAATGCTG CGCGAAGCGG TTGGCAAGAT AAACGTCTCG TTATGATTTT CCAACCACAC
CGTTATAGCC GTACTCGTGA TCTGTACGAT GACTTTGCGA ATGTGCTAGA GCAAGTTGAT
GTATTAATCA TGTTGGATGT ATATGCCGCA GGTGAAAAGC CAATTGCAGG AGCTGATGGA
CGTTCATTGT GTCGCACAAT TCGCAGCCGA GGTAAGGTAG ATCCGATTTT TGTTCCAGAA
ATCGAGCAAT TACCTTCAGT TTTAGCTAAC GTTATACAAG ACGGCGACCT AATCTTAACG
CAAGGCGCGG GTGATGTTGG TAAAGTGGCG AAACAACTGG CAGGTCTTGA ATTAAATATA
AACAAGATGC TTGGTTAA
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| Protein sequence | MTIQHTQDLA QIRAMVPEMR RVKSIHFIGI GGAGMSGIAE VLLNEGYQIT GSDLSENPVT
ERLVSKGATV FIGHQASNVE KASVVVVSTA INEENPEVIA ARELRIPIVR RAEMLAELMR
FRHGIAVAGT HGKTTTTALV TQIYSEAGLD PTFVNGGLVK SAGTNARLGS SRILIAEADE
SDASFLHLQP MVSIVTNIEA DHMDTYGGDF ETLKQTFIDF LHNLPFYGQA IVCIDDPVVR
ELIPRISRQV ITYGFSEDAD VRIENYRQEG QQGKFTVVRK GRANLDITLN IPGRHNALNA
SAAIAVATED DIEDDAILKA MAGTQGTGRR FDHLGEFDTG NGHAMLVDDY GHHPTEVDVT
INAARSGWQD KRLVMIFQPH RYSRTRDLYD DFANVLEQVD VLIMLDVYAA GEKPIAGADG
RSLCRTIRSR GKVDPIFVPE IEQLPSVLAN VIQDGDLILT QGAGDVGKVA KQLAGLELNI
NKMLG
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