| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004483 |
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| Symbol | |
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| ID | 8558251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3204127 |
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| End bp | 3206856 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407612 |
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| Product | protein export cytoplasm protein SecA ATPase RNA helicase |
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| Protein accession | YP_003287106 |
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| Protein GI | 262395252 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.341931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACTA AGCTACTGAC AAAAGTGATT GGCAGTCGCA ACGACCGAAC ACTGCGCCGC
CTTAGAAAAA TTGTAAAAGA AATTAATAAC TACGAGCCAA CATTCGAAGC TCTAAGTGAT
GAAGAGTTAA AAGCAAAGAC GGTTGAGTTC CGTGAGCGCC TAGAGAAAGG TGAAACTCTT
GATAAACTAC TTCCTGAAGC TTTTGCTACG GTTCGTGAAG CATCTAAGCG TGTCTACGGC
ATGCGTCACT TCGACGTTCA GCTTATCGGT GGTATGGTTC TAAATGCGGG TCAAATTGCG
GAGATGCGTA CAGGTGAAGG TAAAACGCTG ACTGCAACGC TTCCAGCTTA CTTAAATGCT
CTTGCTGGTA AAGGCGTTCA CATCGTAACA GTGAACGATT ATCTAGCTAA ACGTGATGCT
GAGACGAACC GCCCTCTATT TGAATTTTTA GGTATGACCG TTGGCGTAAA CGTGCCAAAC
ATGCCTCCTC AAGAGAAAAA AGAAGCGTAC CAAGCTGACA TTCTATACGG AACCAACAAT
GAATTTGGTT TTGACTACCT TCGTGACAAT ATGGCTTTCC GTAGCGAAGA CCGTGTACAG
CGTGATCGCT TCTTTGCTGT TGTCGATGAG GTGGACTCAA TCCTAATTGA TGAAGCTCGT
ACTCCTTTGA TCATTTCTGG TCCTGCTGAA GATAGCTCTG AGCTATACAC TCGAATCAAC
CTTTTGATCC CGCATCTGAA AAAGCAAGAT AAAGAAGACT CTGAAGAATA CCGTGGTGAT
GGTCACTACA CTGTTGATGA AAAATCAAAG CAAGTATACC TAACAGAAAC AGGTCAAGAA
TACGTTGAAG AACTGTTGGT GAAAAACGGT CTGATGGAGG AAGGTGATAC ACTTTACTCT
CCGGCTAACA TCAGCATGTT GCATCACGTG AATGCTGCTT TGCGTGCTCA TGTGTTATTC
GAGCGTAACG TTGATTACAT TGTTACTGAT GAAGGTGAAG TGGTCATCGT TGATGAACAC
ACTGGTCGTA CAATGCCAGG TCGTCGTTGG TCTGAAGGTC TTCATCAAGC AGTAGAAGCG
AAAGAAGGCG TTAAGATCCA AAACGAAAAC CAAACTTTGG CTTCTATTAC CTTCCAGAAC
TACTTCCGTT TATACGAAAA ACTGTCAGGT ATGACAGGTA CAGCGGATAC TGAAGCGTTC
GAATTCCAGT CTATCTATGG TTTGGAAACG GTGGTTATCC CAACCAACAA GCCGATGATT
CGTAACGATA TGCCAGATGT GGTTTACCGT ACTGAAGCAG AGAAGTTTGC GGCAATCATT
GAAGATATTA AAGAGCGTGT TGCCAAAGGG CAGCCAACGC TTGTTGGTAC TGTGTCGATT
GAAAAGTCAG AACTTCTTTC TAACGCATTG AAGAAGGCTA AGATCAAACA CAACGTATTG
AACGCGAAAT TCCATGAGAA AGAAGCGGAA ATTGTTGCTG AAGCGGGCAT GCCTGGTGCG
GTAACTATCG CGACCAACAT GGCCGGTCGT GGTACGGACA TTGTGCTTGG CGGTAGCTGG
CAATCAAAAG TTGAAGCTTT AGAGAACCCA ACTCAAGAGC AAATCGATGC GATTAAAGCA
GAGTGGAAAG TGGTGCATGA CCAAGTGCTA GAAGCTGGTG GTCTACATAT CATCGGTACT
GAGCGCCACG AATCTCGCCG TATTGATAAC CAGCTACGTG GTCGTTCCGG TCGTCAAGGT
GATGCGGGTT CATCGCGCTT CTACCTATCT ATGGAAGACT CTTTGCTACG TATTTTCACT
TCTGATCGTA TGGCGAGCCT TATTCAAAGT GGTATGGAAG AAGGTGAAGC TATTGAATCG
AAAATGCTTT CTCGCTCAAT TGAAAAAGCA CAGCGCAAAG TGGAAGGTCG GAACTTTGAT
ATCCGTAAGC AGCTGCTTGA ATACGATGAT GTAGCGAACG ATCAACGTAA GGTTGTCTAC
GAACTGCGTG ACGAGTTAAT GAACGTTGAA GACATCAGCG GCATGATCGA GCAAAACCGT
GAAGATGTGC TAACAGCGGT TATTGATGAG TACATTCCAC CACAGTCACT AGAAGATATG
TGGGATGTTG AAGGTCTACA AGAGCGCTTG AAAGCGGACT TCGATCTTGA TGCGCCAGTG
AAGCAATGGC TTGAAGAAGA CGACAAGCTT TACGAAGAAG CATTACGTGA AAAGATCATC
AACCTAGCCG TTGAAGTGTA CAAAGAGAAA GAGGAAGTGG TGGGTGCACA AGTGCTTCGC
AACTTCGAAA AATCGGTCAT GCTTCAGACT CTGGATACGC TTTGGAAAGA GCATTTGGCT
GCGATGGATC ACTTGCGTCA AGGTATCCAT TTACGCGGTT ACGCACAGAA GAACCCAAAA
CAAGAATACA AACGTGAGTC GTTTGAACTG TTTGAGGGTC TACTAGAAGC GCTGAAAACA
GACGTTATTA CTGTTCTATC TCGTGTTCGC GTTCAGCAAC AAGAAGAAGT TGAACGTATG
GAAGAACAGC GTCGTGCGCA AGCTGAAGAA GCCGCTCGTC GTGCACAAGC GCAACACGCT
GCAGCACAAA ATCCGCTTTC TGAAGGCGAA GAATCTGAAG AAGGTTCAAA TCAACCAATG
GTACGTGATG AACGTAAAGT CGGTCGCAAT GAACCTTGCC CTTGTGGCAG TGGCAAGAAG
TACAAACAGT GCCACGGCAA AATCGACTAA
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| Protein sequence | MITKLLTKVI GSRNDRTLRR LRKIVKEINN YEPTFEALSD EELKAKTVEF RERLEKGETL
DKLLPEAFAT VREASKRVYG MRHFDVQLIG GMVLNAGQIA EMRTGEGKTL TATLPAYLNA
LAGKGVHIVT VNDYLAKRDA ETNRPLFEFL GMTVGVNVPN MPPQEKKEAY QADILYGTNN
EFGFDYLRDN MAFRSEDRVQ RDRFFAVVDE VDSILIDEAR TPLIISGPAE DSSELYTRIN
LLIPHLKKQD KEDSEEYRGD GHYTVDEKSK QVYLTETGQE YVEELLVKNG LMEEGDTLYS
PANISMLHHV NAALRAHVLF ERNVDYIVTD EGEVVIVDEH TGRTMPGRRW SEGLHQAVEA
KEGVKIQNEN QTLASITFQN YFRLYEKLSG MTGTADTEAF EFQSIYGLET VVIPTNKPMI
RNDMPDVVYR TEAEKFAAII EDIKERVAKG QPTLVGTVSI EKSELLSNAL KKAKIKHNVL
NAKFHEKEAE IVAEAGMPGA VTIATNMAGR GTDIVLGGSW QSKVEALENP TQEQIDAIKA
EWKVVHDQVL EAGGLHIIGT ERHESRRIDN QLRGRSGRQG DAGSSRFYLS MEDSLLRIFT
SDRMASLIQS GMEEGEAIES KMLSRSIEKA QRKVEGRNFD IRKQLLEYDD VANDQRKVVY
ELRDELMNVE DISGMIEQNR EDVLTAVIDE YIPPQSLEDM WDVEGLQERL KADFDLDAPV
KQWLEEDDKL YEEALREKII NLAVEVYKEK EEVVGAQVLR NFEKSVMLQT LDTLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FEGLLEALKT DVITVLSRVR VQQQEEVERM
EEQRRAQAEE AARRAQAQHA AAQNPLSEGE ESEEGSNQPM VRDERKVGRN EPCPCGSGKK
YKQCHGKID
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