| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004469 |
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| Symbol | |
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| ID | 8558237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3189245 |
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| End bp | 3190657 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407598 |
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| Product | glutamate synthase [NADPH] small chain |
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| Protein accession | YP_003287092 |
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| Protein GI | 262395238 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGA ACGTTTATCA ATTTATCGAT GTTCAACGCG TAGATCCTGC GAAGAAGCCT
ATCAAAGTTC GTAAGATCGA GTTCGTTGAA ATCTATGAAC CGTTTACCAA ACAACAAGCG
ACTGCGCAGG CGGATCGCTG CTTAGATTGC GGTAACCCAT ACTGTGAATG GAAGTGCCCA
GTACACAACT ACATCCCTCA ATGGCTAAAA CTGGCAAATG AGGGACGTAT TCTTGAAGCG
GTTGAACTAT CGCATCAAAC CAATAGCCTA CCGGAGGTAT GTGGGCGCGT TTGTCCTCAA
GACCGTCTAT GTGAAGGTTC ATGCACGCTT AATGATGACT TTGGTGCCGT CACCATCGGT
AATATAGAAA AGTACATTAC CGACAAAGCC TTTGAAATGG GCTGGAAGCC AGATATGTCC
AAGGTGGAGT GGACCGATAA AAAGGTCGCA ATCATTGGAG CTGGCCCAGC AGGCTTGGCA
GCCGCTGATA TCCTAGTGCG CAATGGCGTT AAGCCAGTCG TGTTTGACCG CTACCCAGAA
ATCGGCGGAC TACTGACTTT CGGTATCCCT TCGTTCAAGC TTGAAAAAGG GGTAATGGAA
AATCGTCGCC GTGTGTTCAC TGAAATGGGC GTCGAGTTCC GTATGAACGT GGAAGTCGGT
AAAGATGTAC AAATGCAAGA TCTAATCGAT GAGTACGATG CCATTTTCTT AGGCGTTGGC
ACCTATAAAT ACATGCGTGC AGGACTAGAA AATGAGGATG CGCCGGGTGT GTATGACGCG
CTGCCATTTT TAATTTCGAA TACCTACAAA GTCATGGAGC TTGAGAACAA CCAACCTTTT
ATCGACATGG CAGGAAAGAA AGTGGTCGTG CTTGGTGGTG GCGATACCGC AATGGACTGT
GTACGAACCT CTATTCGCCA AGGAGCCTCC AATGTGATTT GTGCTTATCG TCGTGACGAA
GCCAACATGC CAGGTTCACG TCGAGAAGTA AAAAACGCTA AAGAGGAAGG CGTGAAGTTT
ATGTTTAACC TGCAACCACT CGGTGTGGAG GTCGACGCCT CAGGTAACGT ATCGGGCGTT
AAAGTGGTAA AAACCGCTTT AGGTGAGCCC GATGATGCAG GTCGTCGCAG ACCAGAACCA
GTGGAAGGCA GTGAACATGT ATTGCCTGCG GATGCCGTGA TCATGGCATT TGGTTTCCAG
CCACACAAAA TGGATTGGTT GGAACCGTAT GGTGTCGATT TAGACCAATG GGGACGTATC
AAGGCACCTA TTGAGCAAGC GTTCATGTAT CAAACCAGCA ATGCGAAAAT CTTCGCTGGC
GGTGATGCGG TCCGTGGCTC AGACCTCGTC GTAACCGCCA TTGATGAAGG GCGAAAAGCG
GCAGAAGGCA TTCTTGATTA CCTAGAAGTC TAA
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| Protein sequence | MSQNVYQFID VQRVDPAKKP IKVRKIEFVE IYEPFTKQQA TAQADRCLDC GNPYCEWKCP
VHNYIPQWLK LANEGRILEA VELSHQTNSL PEVCGRVCPQ DRLCEGSCTL NDDFGAVTIG
NIEKYITDKA FEMGWKPDMS KVEWTDKKVA IIGAGPAGLA AADILVRNGV KPVVFDRYPE
IGGLLTFGIP SFKLEKGVME NRRRVFTEMG VEFRMNVEVG KDVQMQDLID EYDAIFLGVG
TYKYMRAGLE NEDAPGVYDA LPFLISNTYK VMELENNQPF IDMAGKKVVV LGGGDTAMDC
VRTSIRQGAS NVICAYRRDE ANMPGSRREV KNAKEEGVKF MFNLQPLGVE VDASGNVSGV
KVVKTALGEP DDAGRRRPEP VEGSEHVLPA DAVIMAFGFQ PHKMDWLEPY GVDLDQWGRI
KAPIEQAFMY QTSNAKIFAG GDAVRGSDLV VTAIDEGRKA AEGILDYLEV
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