Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004467 |
Symbol | |
ID | 8558235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 3182840 |
End bp | 3184309 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646407596 |
Product | glutamate synthase [NADPH] small chain |
Protein accession | YP_003287090 |
Protein GI | 262395236 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAGC CTACTGGATT TTTAGAGCAT GGTCGTGAAC TACCACAGAA GATCGACCCA GCTGAACGCA TCAAGAACAA CAAAGAGTTC GTTCTGAACG AGGAGTTTGG TGACAAGATC AATACTCAAG CGTCTCGTTG TATGGATTGT GGTGTGCCGT TTTGTCATAA CGGCTGCCCT ATCGGTAACA TCATCCCAGA GTTTAACGAT GCGGTTTATC GTGATAGCTG GGAAGAAGCA TGGAACATTC TAAGCTCAAC CAATAACTTC CCAGAGTTTA CTGGTCGTGT TTGCCCTGCT CCATGTGAAA GTGCTTGTGT ACTTGGCATC AACCAAGACC CAATCACCAT CTGTAACATC GAGAAAACCA TCGTAGAAAC GGCGTATCGT GAAGGGTACG CCAAGCCAAA AACGCCACGT TCTCGCACTG GTAAAACGAT AGCGATCATT GGATCTGGAC CAGCGGGTCT TGCGGCTGCT GAGCAGCTAA ACAGCGCTGG TCATACTGTG ACAGTATTCG AGCGAGACGA GAAGGTTGGT GGTCTGCTGC GTTTCGGTAT TCCAGATTTT AAACTGAGCA TGGAAGTCAT TGATCGTAAG ATCAATCTAA TGGCAGAAGC TGGCGTTGAG TTTAAAGTAA ACCAACACGT CGGTGTTGAT GTAAATGCTC AGCAACTGCG TCAAGAGTTC GATGTGGTTC TACTGACGGG TGGCTCAACG GTTCCACGTG ATTTGCCAGT TCCGGGTCGT GAGCTCAAAG GCGTTCACTT CGCAATGGAA TTCCTAGGTC AAAACAACCG ACGTGCAAAT AACATGGACC TGAAAACGGA AGAGATTCAC GCAAAAGGTA AACATGTGGT TGTCATTGGT GGTGGTGATA CCGGTTCAGA CTGTGTAGGT ACGTCAAACC GTCACGGCGC AGCAAGCGTA ACTCAAGTGG AAATCATGCC GATTCCACCA GAGAAGCGCC CAGCCAATAT GCCTTGGCCT CAATACCCAA TGATCCTACG TACTTCGACC TCTCATGAAG AAGGTGTCGA TCGTCACTGG AACATCCTGA CCAAAGAGTT CATCGGAAAT GACAAAGGTG AAGTCACAGG CCTTCGTCTT GCTGATATCG TTTGGCAAGA TGCAAAACCA GGCGAGCGCC CAAGTTTCAA AGAAGTAGAA GGCAGCGAGC GAGTGATCCC ATGTGATATG GCATTCCTAG CAATGGGCTT CTTACACCCA GAACCTACAG GCGTGCTTGC TCAACTGGAT ATCGCGCTAG ATGATCGCGG TAACGTAGCA ACTCAAGGTT TTGCTACTAA CCAAGAAGGC GTATTTGCTG CTGGTGATAT GCGAACAGGC CAATCTTTGG TGGTTCGTTG TATCAACGAA GGTCGCGAAT GTGCTCGTGC TATCGATGAC TACCTAATGG ATGGCACAAA CCTAGAAGCA AAAGCAGATT CACTGATGCT TTCTGCTTAA
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Protein sequence | MGKPTGFLEH GRELPQKIDP AERIKNNKEF VLNEEFGDKI NTQASRCMDC GVPFCHNGCP IGNIIPEFND AVYRDSWEEA WNILSSTNNF PEFTGRVCPA PCESACVLGI NQDPITICNI EKTIVETAYR EGYAKPKTPR SRTGKTIAII GSGPAGLAAA EQLNSAGHTV TVFERDEKVG GLLRFGIPDF KLSMEVIDRK INLMAEAGVE FKVNQHVGVD VNAQQLRQEF DVVLLTGGST VPRDLPVPGR ELKGVHFAME FLGQNNRRAN NMDLKTEEIH AKGKHVVVIG GGDTGSDCVG TSNRHGAASV TQVEIMPIPP EKRPANMPWP QYPMILRTST SHEEGVDRHW NILTKEFIGN DKGEVTGLRL ADIVWQDAKP GERPSFKEVE GSERVIPCDM AFLAMGFLHP EPTGVLAQLD IALDDRGNVA TQGFATNQEG VFAAGDMRTG QSLVVRCINE GRECARAIDD YLMDGTNLEA KADSLMLSA
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