| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004466 |
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| Symbol | |
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| ID | 8558234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3178290 |
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| End bp | 3182840 |
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| Gene Length | 4551 bp |
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| Protein Length | 1516 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407595 |
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| Product | glutamate synthase [NADPH] large chain |
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| Protein accession | YP_003287089 |
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| Protein GI | 262395235 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATA GAGAGCAAAA TCCACAGGGT CTATATACTC CTGAATTGGA GCATGACGCG
TGTGGTATCG GTTTTGTTGC TCACCTTAAA AACCGTAAAT CTCATGAAGT AGTGACTCAA
GCATTGGATA TGCTAGCTCG CATGGAGCAC CGTGGTGGTC AAGGTTGTGA CCCATGCAGC
GGTGATGGTG CGGGTATCTT GCTACAAAAA CCTCATGAAT TCCTATTAGA AGAGGCCGTT
AAGCTCGGCA TTAAACTGCC TTCATTTGAA AAGTATGGTG TGGGTGTCGT ACTTTTCCCG
AAAGACGAAT ACAAACGCGA GCAATGCCGT GACATTCTAG AACGCAACGC TCAGCGTCTA
GACCTTGAAG TTATTGGCTA CCGCGTATTG CCAACCGATA ACTCAATGAT CGGTGCCGAC
CCGCTAAGCA CAGAACCTAA GTTTGAGCAT GTGTTTATCT CTGGTGGTCC AGGTATCACA
CCTGAAGAGC TAGAGCGCAA ACTGTACGTA CTTCGTAACT ACACTGTACG TGTTTGCCTA
GAAAGCGTTT CGAACATTGG TGATGACTTC TACATTAACT CAATGTCTTA CAAGACATTG
GTGTACAAAG GTCAGTTAAC GACCGAGCAA GTCCCTCAGT ACTTCCTTGA TCTGCAAAAC
CCGACCATGG TGACCGCACT GGCACTGGTA CACTCTCGCT TCTCTACCAA CACCTTCCCG
AAATGGCGTC TTGCACAACC TTTCCGTTAC ATTGCCCACA ACGGTGAAAT CAATACAGTT
CGAGGTAACT TGAACTGGAT GAAAGCCCGT GAGGCGATCA TTGAATCCGA TCTATTTACC
CAAGCTGAAA TCGACATGCT GCTTCCTATT TGTCAGGAAG GCAGTTCGGA TTCATCTAAC
TTTGATATGG CACTTGAGCT CCTAGTTCTT TCTGGTCGTA GCCTGCCGCA CGCATTGATG
ATGATGATCC CGGAAGCATG GCAAGAAAAC AAAAACATGG ATCCTAAGCG TCGCGCGTTC
TATCAGTACC ACGCGAACAT CATGGAACCA TGGGATGGTC CGGCTTCAGT ATGTTTTACT
GATGGTGTTC AAGTTGGTGC GACACTCGAC CGTAACGGTC TGCGCCCTTC TCGCTACACA
GTGACCAAAG ATAACTTCCT AGTAATGGCA TCAGAATCTG GTGTTGTGGA TATTGAGCCA
GAGAACGTTG AGTTCCGCGG TCGTCTACAA CCAGGTCGCA TCTTCGTTGC AGACTTAGAG
CAAGGTCGCA TCATCTCTGA TGAAGAAGTG AAAGACACCA TCGCAACAGC GCAGCCTTAC
GAAAAGTGGG TAGAAGAAAA CCTACTGAGC TTGAAGAAGC TGCCAGATGC GAGCAACCAA
TTCAGCCAAC CTAAGCCAGA ACATCTTCTA CACCGCCAAC AAGCGTTTGG CGTAAGTACT
GAAGAAGTGA ACGAAATCAT CGTTCCAATG GCGAATGATG CGAAAGAGCC ATTATCAGCC
ATGGGTGCAG ACTGGCCTCT TGCGGTTCTA TCTCATCAGT CTCAACATCT TTCAAACTAC
TTCAAGCAAC TGTTCGCACA GGTAACTAAC CCACCGATCG ATCCGATCCG TGAGCGTATG
GTTATGTCGC TGAACACTTA CTTGGGTAAA GACCAAAACC TTCTGACTGA AACACCACTT
CACTGTCAGA AAGTCGAATT GGAATCGCCT GTTCTGGCGA ACTCTGAGCT TGAGAAACTG
CGTGCTATTG ACAACGAGCA TCTTCAGGCG AAGACACTGG ATATCGTATT CCAAGCCAGT
GAAGACCAAG GCAAGCTTGA GCGCGCACTA AAACGTATCT GCCAATACGC AGAAGATGCG
GTTATTGATG GTTACTCAAT CATCCTGCTA ACTGACCGTG CAGTGAACTC AAACCACGCC
GCTATCCCAG CCATGCTGGC AGTTGGCGCA GTACATCACC ACCTGATCCG TAAAGGCCTA
CGTGCGAAGT GTGACATCGT GGTTGAAACC GGTGACGCGC GTGAAACGCA CCACTTTGCA
ACCCTTATTG GCTATGGTGC AAATGCGGTT AACCCTTACC TAGTTATCGA AACTATCATT
GAACTACAAC GCACGAAGAA GCTGGATCCA GAAGCGAACC CTCGTGATCT GTTCAACAAC
TACCGTAAAG CGATCAATGG CGGTCTTCTG AAGATCTTCT CGAAGATGGG TATCTCAACC
CTGCAGTCGT ACCACGGTGC GCAAATCTTC GAAGCCTTAG GTATTCATAA GTCAGTGGTA
GACAAGTACT TCACAGGTAC AGTTTCTCGT ATCCAAGGTC TCACCCTTGA CGATATTGCT
AAAGAAGTGC TCGTTCGTCA CCGCATCGGT TATCCACAAC GCGAAATCCC AATTCAAATG
CTGGATGTGG GTGGTGTTTA CCAATGGAAA CAGCGTGGCG AGAAGCACCT CTTCAACCCT
GAAACCATTT CTCTACTACA AGAGTCTACG CGCAACAAGA ACTACGATCA GTTCAAGCAG
TACGCGACAG CAGTCGATAA ACAAGGTGAC AACGCGGTAA CTCTGCGTAG CCAGCTTGAG
TTTATTAAGA ACCCAGCCGG CTCTATCTCT ATCGACGAAG TCGAGCCAAT TGAAAGCATC
GTGAAACGCT TCGCGACGGG TGCTATGTCA TTCGGTTCTA TTTCTTACGA AGCACACTCC
ACACTAGCTG TTGCGATGAA CCGTCTTGGC GCGAAATCGA ACTCTGGTGA AGGTGGTGAA
GACCCAATGC GTTTCGAGCG CAAAGAGAAC GGCGATTGGG AACGCTCTGC AATCAAGCAG
GTAGCTTCGG GTCGTTTCGG CGTAACCTCT TACTACCTAA CCAACGCTGA TGAGCTACAA
ATCAAGATGG CTCAAGGTGC GAAACCAGGT GAAGGTGGTC AGCTACCAGG CGATAAAGTA
GATGACTGGA TCGGTGCTAC ACGCCACTCA ACTCCGGGCG TCGGTCTTAT CTCGCCGCCA
CCACACCACG ATATCTACTC AATCGAAGAT TTGGCTCAGC TTATCTACGA TTTGAAGAAC
GCGAACCGCG CGGGTCGTGT AAACGTGAAG CTGGTATCGG AAGCTGGCGT AGGTACGATC
GCTTCTGGTG TTGCTAAAGC GAAAGCGGAC GTTGTACTTA TCGCAGGTTT CGACGGCGGA
ACTGGTGCAT CACCAATGTC TTCAATCCGT CATACTGGTC TTCCTTGGGA ACTTGGCTTG
GCAGAAACGC ACCAAACGCT ACTGAAGAAC GGTCTACGTA ACCGTATCGT GGTTCAAGCG
GATGGCCAGA TGAAGACACC TCGTGATCTT GCAGTCGCAA CACTACTTGG TGCAGAAGAA
TGGGGTGTAG CAACCGCAGC ATTGGTGGTT GAAGGTTGTA TCATGATGCG TAAGTGTCAT
AAGAACACCT GTCCTGTTGG TATCGCAACT CAGAACAAGA CGCTTCGCGA GCGCTTTGAT
GGTCGCGTAG AAGACGTCGT AACCTTCTTC CAATACATGG CACAAGGTCT ACGTGAAATC
ATGGCTGAAC TTGGCTTCCG CACTATCGAT GAGATGGTCG GTCAAGGTCA GAAGCTGAAG
ATTCGCCAAG ACGTTTCTCA CTGGAAATAC AAGAACCTAG ATCTGTCTCC TGTTCTCCAC
GTTGAGCAAC CACGTGAAGC TGATGGTGTT TTCAACCAAG CTCAGCAGAA CCATAACCTA
GAAGAAGTGC TAGACCGTAA GCTGATTCAA GCAGCGATTC CTGCACTCGA GAAAGGCGAA
GAGGTGAATG CGGAATTCCC TATCGTCAAC ACGGACCGCT CTGCAGGTAC CATGCTGTCG
AACGAAATCT CGAAAGTGTA TAAAGATGCG GGTCTACCTC AGCCAATGAA CGTGAAGTTC
AAAGGCTCTG CGGGTCAGTC ATTCGGTGCA TTCCTCGCTA AGGGCGTGAA GTTCGAAGTG
GAAGGCGACG CGAACGACTA CTGGGGTAAA GGCTTATCTG GCGGTACGTT AGTACTTTAC
CCAGATGCGA AATCAAGCAT TGTCGCAGAA GATAACATCG TGGTTGGTAA CGTGTGTTTC
TACGGTGCCA CTTCGGGTGA GTCTTTCATT CGCGGTATGG CTGGCGAACG TTTCTGTGTT
CGTAACTCAG GCGCGAAAGT AGTAGTAGAA GGCGTCGGTG ACCACGGTTG TGAATACATG
ACGGGCGGTG CAGCAATTAT CCTTGGTTCA ACAGGTCGTA ACTTTGCCGC AGGTATGAGT
GGCGGCGTGG CTTACGTATG GGATAAATCA GGCGACTTTG AGTCGAAACT GAACCCAGAG
TTAGTAGACC TAGATCCAAT CGAGCAAGAA GACAGAGATC TATTACTCGA CATGCTAACT
AAGCATGTTC AATTCACAGG AAGTGAAGTC GCTCAGTCTT TCCTAGACAA CTTTGAAGCA
AGCCTAGCCT CTATGGTTAA GGTAATGCCG CGTGACTATA AAGCGGTGCT TCAAAAGCGT
AAAGCTGAAG CACAGTCTCA AGGAAACGAA ACTCAAGTGG AGGCCGTATA A
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| Protein sequence | MVDREQNPQG LYTPELEHDA CGIGFVAHLK NRKSHEVVTQ ALDMLARMEH RGGQGCDPCS
GDGAGILLQK PHEFLLEEAV KLGIKLPSFE KYGVGVVLFP KDEYKREQCR DILERNAQRL
DLEVIGYRVL PTDNSMIGAD PLSTEPKFEH VFISGGPGIT PEELERKLYV LRNYTVRVCL
ESVSNIGDDF YINSMSYKTL VYKGQLTTEQ VPQYFLDLQN PTMVTALALV HSRFSTNTFP
KWRLAQPFRY IAHNGEINTV RGNLNWMKAR EAIIESDLFT QAEIDMLLPI CQEGSSDSSN
FDMALELLVL SGRSLPHALM MMIPEAWQEN KNMDPKRRAF YQYHANIMEP WDGPASVCFT
DGVQVGATLD RNGLRPSRYT VTKDNFLVMA SESGVVDIEP ENVEFRGRLQ PGRIFVADLE
QGRIISDEEV KDTIATAQPY EKWVEENLLS LKKLPDASNQ FSQPKPEHLL HRQQAFGVST
EEVNEIIVPM ANDAKEPLSA MGADWPLAVL SHQSQHLSNY FKQLFAQVTN PPIDPIRERM
VMSLNTYLGK DQNLLTETPL HCQKVELESP VLANSELEKL RAIDNEHLQA KTLDIVFQAS
EDQGKLERAL KRICQYAEDA VIDGYSIILL TDRAVNSNHA AIPAMLAVGA VHHHLIRKGL
RAKCDIVVET GDARETHHFA TLIGYGANAV NPYLVIETII ELQRTKKLDP EANPRDLFNN
YRKAINGGLL KIFSKMGIST LQSYHGAQIF EALGIHKSVV DKYFTGTVSR IQGLTLDDIA
KEVLVRHRIG YPQREIPIQM LDVGGVYQWK QRGEKHLFNP ETISLLQEST RNKNYDQFKQ
YATAVDKQGD NAVTLRSQLE FIKNPAGSIS IDEVEPIESI VKRFATGAMS FGSISYEAHS
TLAVAMNRLG AKSNSGEGGE DPMRFERKEN GDWERSAIKQ VASGRFGVTS YYLTNADELQ
IKMAQGAKPG EGGQLPGDKV DDWIGATRHS TPGVGLISPP PHHDIYSIED LAQLIYDLKN
ANRAGRVNVK LVSEAGVGTI ASGVAKAKAD VVLIAGFDGG TGASPMSSIR HTGLPWELGL
AETHQTLLKN GLRNRIVVQA DGQMKTPRDL AVATLLGAEE WGVATAALVV EGCIMMRKCH
KNTCPVGIAT QNKTLRERFD GRVEDVVTFF QYMAQGLREI MAELGFRTID EMVGQGQKLK
IRQDVSHWKY KNLDLSPVLH VEQPREADGV FNQAQQNHNL EEVLDRKLIQ AAIPALEKGE
EVNAEFPIVN TDRSAGTMLS NEISKVYKDA GLPQPMNVKF KGSAGQSFGA FLAKGVKFEV
EGDANDYWGK GLSGGTLVLY PDAKSSIVAE DNIVVGNVCF YGATSGESFI RGMAGERFCV
RNSGAKVVVE GVGDHGCEYM TGGAAIILGS TGRNFAAGMS GGVAYVWDKS GDFESKLNPE
LVDLDPIEQE DRDLLLDMLT KHVQFTGSEV AQSFLDNFEA SLASMVKVMP RDYKAVLQKR
KAEAQSQGNE TQVEAV
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