| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004452 |
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| Symbol | |
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| ID | 8558220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3161589 |
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| End bp | 3162476 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407581 |
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| Product | endonuclease IV |
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| Protein accession | YP_003287075 |
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| Protein GI | 262395221 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.034826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA TGAAAAACAA GCTTGGGAAT AAACTCATTG GTGCACATGT CTCTGCTGCT
GGTGGGGTCG ATCAAGCGCC GTTGAGAGCT CGCGAAATTG GCGCGAATGC GTTCGCACTA
TTTACAAAAA ACCAACGCCA GTGGGTGGCG AAGCCTTTAG AAGCAAAAAC CATCAGTGCG
TTTAAAGCGA ACTGTAAAAT GCTGGGTTTC GGCGCAGAAC ATATTCTTCC CCATGACTCT
TATCTAATTA ACTTAGGTGC ACCAGAAGCG GATAAGTTGG ATAAGTCACG CGCTGCATTC
ATCGATGAGA TGGAGCGTTG TAATCAATTG GGTTTAACGT TGCTGAACTT TCACCCTGGG
AGCCACTTAA AGAAAGTCTC GGAACAGGAG TGCTTAGCGA CGATCGCTGA GTCGATCAAT
CTTGCGCACA AAGCGGTGCC GAATGTGATC GCGGTAATCG AGAATACGGC TGGTCAGGGT
ACAAACCTAG GTTGGAAGTT TGAGCATCTT GCTGAAATCA TCGATCAAGT GGAAGACAAA
GAACGTGTTG GTGTATGTCT CGATACTTGC CACACGTTTA CTGCCGGTTA CGATCTGCGT
ACTAAAGAGG ATTGTGAGCA TACCTTTGCG GAATTCGACC GTATTGTTGG GATGCACTAT
TTAAGAGCAA TGCATCTAAA TGATTCAAAA GTTGAGTTTG CCAGCAAAGT GGATCGCCAC
CACTCATTAG GCAAAGGAGA AATCGGGTGG GATTGCTTTG AGTACATCGC GAAAGACCCT
CGATTTGATG GTATCCCTCT GATTTTAGAA ACAATTGATC CGGACATCTG GCAGCAAGAA
ATCAACGCAC TGCGTCAGTT TCATCTAGCG GCGATAGGTA ACCAATGA
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| Protein sequence | MTNMKNKLGN KLIGAHVSAA GGVDQAPLRA REIGANAFAL FTKNQRQWVA KPLEAKTISA
FKANCKMLGF GAEHILPHDS YLINLGAPEA DKLDKSRAAF IDEMERCNQL GLTLLNFHPG
SHLKKVSEQE CLATIAESIN LAHKAVPNVI AVIENTAGQG TNLGWKFEHL AEIIDQVEDK
ERVGVCLDTC HTFTAGYDLR TKEDCEHTFA EFDRIVGMHY LRAMHLNDSK VEFASKVDRH
HSLGKGEIGW DCFEYIAKDP RFDGIPLILE TIDPDIWQQE INALRQFHLA AIGNQ
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