Gene VEA_004450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004450 
Symbol 
ID8558218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp3160625 
End bp3161305 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content45% 
IMG OID646407579 
Producturacil-DNA glycosylase 
Protein accessionYP_003287073 
Protein GI262395219 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0252327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGT CACCCACTTG GCACGATGTG ATCGGCGAAG AGAAAAAACA GAGCTACTTT 
GTAGACACTT TGAATTTTGT AGAAGCAGAA CGCGCCGCAG GCAAAGCGAT TTTCCCGCCA 
GCGAAAGATG TCTTTAATGC GTTTCGTTTT ACCGAGTTTA ACGATGTTAA AGTAGTGATT 
CTGGGACAAG ACCCATACCA TGGTCCAAAT CAGGCGCATG GTTTGTGCTT TTCCGTGCTT 
CCTGGAATCA AAACGCCACC ATCACTCGTT AATATGTATA AAGAGCTGGC TCAAGATATT 
GAAGGGTTCC AGATCCCTCA GCATGGATTC TTACAAAGTT GGGCTGAGCA AGGTGTATTG 
TTGCTCAATA CGGTATTGAC GGTTGAGCAA GGTAAAGCGC ATTCACATTC AAAAACGGGG 
TGGGAAACGT TCACTGACCG AGTGATTGAA GCGATAAACC AGCATCAGGA AGGCGTGGTG 
TTTTTATTGT GGGGCTCTCA CGCTCAGAAG AAAGGGCGCT TTATTGATCG CAATAAACAT 
CATGTGTTAG CCGCACCACA TCCATCACCA CTCTCAGCAC ACCGAGGTTT TTTTGGTTGT 
AAGCATTTCT CTCAAGCAAA CCAGTTACTT GCCTCGCAAG GAAAAGCACC AATCAACTGG 
CATTTGCCAT TAACTGTATA A
 
Protein sequence
MNQSPTWHDV IGEEKKQSYF VDTLNFVEAE RAAGKAIFPP AKDVFNAFRF TEFNDVKVVI 
LGQDPYHGPN QAHGLCFSVL PGIKTPPSLV NMYKELAQDI EGFQIPQHGF LQSWAEQGVL 
LLNTVLTVEQ GKAHSHSKTG WETFTDRVIE AINQHQEGVV FLLWGSHAQK KGRFIDRNKH 
HVLAAPHPSP LSAHRGFFGC KHFSQANQLL ASQGKAPINW HLPLTV