Gene VEA_004446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004446 
Symbol 
ID8558214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3156498 
End bp3157274 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content44% 
IMG OID646407575 
Producthypothetical protein 
Protein accessionYP_003287069 
Protein GI262395215 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00375515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTATCG TAGTTTCTCC AGCGAAGACT CTTGATTACG AGTCTCCGTT AGCGACAGAA 
AAATTTACTC AACCTGAGTT GGTCGAATAC TCAAAAGAGC TTATCGATGT TTGCCGCAAA
CTGACTCCTG CTGATGTTGC CTCTTTAATG AAAGTGAGCG ACAAGATTGC CGATTTGAAT
GTCGGGCGAT TTCAAGAGTG GAGTGAAACG TTTACCACAG AAAACTCACG ACAAGCGATC
CTAGCGTTTA AAGGTGATGT TTACACAGGA CTAGACGCCG AAACCTTATC TGAGGCGGAC
TTCGAGTATG CCCAAGATCA TTTGCGCATG TTGTCTGGCC TCTATGGTTT ACTAAAACCA
CTCGATTTGA TGCAGCCATA CCGTCTTGAA ATGGGTACCA AGCTTGCAAA CGACAAGGGC
ACAAACTTGT ACCAGTTTTG GGGCAATGTG ATTACGGATA AGCTTAACGA AGCGATTTCT
GCTCAAGGTG ATAATGTGCT TATCAACCTA GCATCAAATG AATACTTTAA AGCGGTGAAG
CCAAAGAACT TAGATGCGCA AGTGATCACG CCAGTATTCA AAGATTGTAA GAATGGCCAA
TACAAGGTCA TCAGCTTCTA CGCGAAGAAA GCGCGCGGCA TGATGGCGCG TTACATCATC
GAAAACCGTA TTGAGAGCGT GGCAGATCTG ACTAAGTTTG ATACGGCGGG TTACTACTTT
GTTGAAGATG AATCGACACC AACAGAGTTA GTATTTAAAC GCGAAGAGCA AAACTAA
 
Protein sequence
MLIVVSPAKT LDYESPLATE KFTQPELVEY SKELIDVCRK LTPADVASLM KVSDKIADLN 
VGRFQEWSET FTTENSRQAI LAFKGDVYTG LDAETLSEAD FEYAQDHLRM LSGLYGLLKP
LDLMQPYRLE MGTKLANDKG TNLYQFWGNV ITDKLNEAIS AQGDNVLINL ASNEYFKAVK
PKNLDAQVIT PVFKDCKNGQ YKVISFYAKK ARGMMARYII ENRIESVADL TKFDTAGYYF
VEDESTPTEL VFKREEQN