Gene VEA_004438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004438 
Symbol 
ID8558206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3147113 
End bp3147895 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID646407567 
Productpeptide chain release factor 2 
Protein accessionYP_003287061 
Protein GI262395207 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGAGA AGCTAGAAAA GCTTGAATTC CGTCGTATGT TCTCGGGCGA CCATGATAGT 
TCAGATTGCT ACATCGATTT GCAAGCTGGC TCTGGTGGTA CGGAAGCACA AGACTGGACC
AACATGCTGC TGCGTATGTA CCTACGCTGG GCAGAGGCGA AGGGCTTCAA AGCTGAAGTG
ATTGAAGTCT CTGAAGGTGA AGTCGCGGGT CTTAAGTCGG CAACAGTTCG CATCTCTGGT
GAGTATGCCT ACGGTTGGTT GCGCACTGAA ACGGGCGTTC ATCGTCTTGT TCGTAAATCT
CCGTTCGATT CAGGCGGCCG TCGCCATACG TCATTTGCGT CTGCGTTCAT CTATCCAGAG
ATTGATGAAA ACATCGATAT CGACATTAAT CCTTCTGACC TACGCATCGA CGTTTACCGT
GCGTCAGGCG CAGGTGGTCA GCACGTCAAC ACCACAGAAT CTGCGGTACG TATTACGCAC
GTACCAACGA ACACCGTGGT TCAGTGTCAG AATGACCGTT CTCAACATAA GAACAAAGAT
CAGGCAATGA AACAGCTTCG AGCGAAGCTA TTTGAGCTTG AATTGCAAAA GCAAAACGCG
GAAAAACAAG CTAATGAAGA CGCTAAGTCT GACATTGGCT GGGGTAGCCA GATCCGTTCT
TACGTATTGG ATGACTCACG TATTAAGGAC CTCCGTACGG GCATTGAAAA CCGTAATACT
CAAGCGGTTC TTGATGGCGA TCTGGACAAA TTTATTGAAG CTAGCCTGAA ATCAGGCCTA
TAA
 
Protein sequence
MEEKLEKLEF RRMFSGDHDS SDCYIDLQAG SGGTEAQDWT NMLLRMYLRW AEAKGFKAEV 
IEVSEGEVAG LKSATVRISG EYAYGWLRTE TGVHRLVRKS PFDSGGRRHT SFASAFIYPE
IDENIDIDIN PSDLRIDVYR ASGAGGQHVN TTESAVRITH VPTNTVVQCQ NDRSQHKNKD
QAMKQLRAKL FELELQKQNA EKQANEDAKS DIGWGSQIRS YVLDDSRIKD LRTGIENRNT
QAVLDGDLDK FIEASLKSGL