| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004429 |
|---|
| Symbol | |
|---|
| ID | 8558197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 3136687 |
|---|
| End bp | 3137478 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646407558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003287052 |
|---|
| Protein GI | 262395198 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.108567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCT CTTTATTTTT GTTATTGTTG GCGCTAGGCG CTTTTGTGGG TGTGATGGCG
GGGTTACTCG GTATCGGTGG TGGTTTGATT GTTGTTCCTG CCTTGTTGTA TTTGCTTCCT
CTTGCTGGAA TCTCTCCAGA AATGAGTATG CACATGGCCC TAGCCACTTC GTTAGCGAGT
ATTATTGTCA CGTCAGGCTC ATCGGCGATG AATCACCTTA AGCTCGGCAA TGTCGATATG
TTCGTCGTAA AATGGTTGAT GCCAGGTGTG GTTATAGGTG GTTTTGTCGG TGCCAATATT
GCTGAGTGGA TCCCTACGCA CTACTTGCCG AAAGTATTTG GTGTCATTGT TCTTTGCCTG
TCAGTACAAA TGTTCCGTTC CATTAAAGTT ACGAGCAGTA AACCTATGCC GAGCAGCCCG
GTGACCGTTG CGTATGGCAC GGGGATTGGC GTCGTATCAA GCCTTGCTGG TATTGGTGGT
GGTTCACTGT CGGTCCCATT TTTAAATAAA CACGGGATAG AAATGCGTAA AGCGGTAGGT
TCATCTTCCG TTTGTGGTTG CGTGATTGCT ATTTCTGGTA TGATCGGTTT CATCTTACAT
GGCTATAAAG TGGAAGGCTT ACCTTCATAC AGTATTGGCT ATGTTTATCT TCCCGCTTTA
TTAGCGATTG CCATGGCCTC GATGCTCACA ACAAAAGTGG GTGCGAAGCT GGCAACTAAC
CTTCCAACTG CGGTATTAAA AAAGATATTC GCGGTGTTCT TAATGTTTGT AGCAGCGACC
ATGCTGCTTT AA
|
|---|
| Protein sequence | MTVSLFLLLL ALGAFVGVMA GLLGIGGGLI VVPALLYLLP LAGISPEMSM HMALATSLAS
IIVTSGSSAM NHLKLGNVDM FVVKWLMPGV VIGGFVGANI AEWIPTHYLP KVFGVIVLCL
SVQMFRSIKV TSSKPMPSSP VTVAYGTGIG VVSSLAGIGG GSLSVPFLNK HGIEMRKAVG
SSSVCGCVIA ISGMIGFILH GYKVEGLPSY SIGYVYLPAL LAIAMASMLT TKVGAKLATN
LPTAVLKKIF AVFLMFVAAT MLL
|
|---|
| |