| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004416 |
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| Symbol | |
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| ID | 8558184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3122047 |
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| End bp | 3123012 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407545 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_003287039 |
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| Protein GI | 262395185 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.900056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATG AAATGAAAAT CCTATTAGCT AACCCACGCG GCTTTTGTGC TGGTGTAGAC
CGTGCGATTA GCATCGTAGA GCGTGCGCTA GAGATGTATC AGCCACCGAT TTATGTTCGT
CATGAGGTGG TGCATAACCG TTTTGTGGTT GAAGGGCTAA AACAACGTGG CGCTGTCTTC
GTTGAAGAGC TGCATGAAGT GCCAGACAAC AACATTGTGA TTTTTTCTGC TCATGGTGTA
TCGCAGGCGG TTCGTCAGGA AGCCAAGCAG CGAGATTTGA CGGTATTTGA CGCGACTTGC
CCGTTGGTAA CCAAAGTGCA TATGGAAGTA GCGCGAGCAA GCCGCCGCAA TATGGAAGTG
GTTCTGATTG GTCACGCAGG TCACCCTGAA GTGGAAGGCA CAATGGGGCA GTACGCGAGT
GAAACCGGTG GTATGTACTT GGTTCAAACC CCGGCCGATG TTGAGAAACT GAAGTCGATT
GTGAAAGATC CATCTGATCT TCATTACGTA AGCCAAACGA CACTTTCTGT AGATGAAACT
GCCGATGTTA TCGAAGAGCT ACGCCGCGTC TTCCCAGATA TCCAAGGACC ACGTAAAGAC
GATATCTGTT ACGCGACACA AAACCGCCAA GATGCCGTAC GTGAATTAGC GGGTGACGTA
GATGTGATGG TTGTGGTGGG TTCTAAAAAC TCATCAAACT CTACACGTCT TAAAGAGCTA
GCTGAAAAGC TAGGGACACC TGGCTACTTA ACCGACTGTC CGGAAGATAT CAAACCTGAG
TGGTTCGAAG GCAAAACAAA GGTCGGCGTG ACTGCGGGAG CATCTGCTCC GGAAGAGCTC
GTCAATCAGA TTCTAGAGCG AATCAAAGAA CTCGTCGGTG CCGAAGCGGT CGATGAAGTA
CTTGGTCGCG AAGAGAATAT GTTCTTTGAA GTACCTAAAG AACTGCAAAT CAAGCAAGTG
GATTAA
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| Protein sequence | MSNEMKILLA NPRGFCAGVD RAISIVERAL EMYQPPIYVR HEVVHNRFVV EGLKQRGAVF
VEELHEVPDN NIVIFSAHGV SQAVRQEAKQ RDLTVFDATC PLVTKVHMEV ARASRRNMEV
VLIGHAGHPE VEGTMGQYAS ETGGMYLVQT PADVEKLKSI VKDPSDLHYV SQTTLSVDET
ADVIEELRRV FPDIQGPRKD DICYATQNRQ DAVRELAGDV DVMVVVGSKN SSNSTRLKEL
AEKLGTPGYL TDCPEDIKPE WFEGKTKVGV TAGASAPEEL VNQILERIKE LVGAEAVDEV
LGREENMFFE VPKELQIKQV D
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