Gene VEA_004400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004400 
Symbol 
ID8558168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3104702 
End bp3105010 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content41% 
IMG OID646407529 
ProductTrp operon repressor-like protein 
Protein accessionYP_003287023 
Protein GI262395169 
COG category[K] Transcription 
COG ID[COG2973] Trp operon repressor 
TIGRFAM ID[TIGR01321] trp operon repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACG AACCCGAGTA CAAAGACTGG CAACAGATTA TTGAGCTAAT TCGAACTAGC 
ATGGACAGTG AGCAAGATGA CATGCTGTTA ACCATGCTGA TGTCACGTGA TGAGAGAGAA
TCATTAATAT CACGCGTTAA TATTATTAAC GAGCTTCTTA AAGGAGAATT ATCTCAACGT
CAGATCAGCC AGATGCTTGG CGTGGGTATT GCCACTATTA CTCGTGGTTC TAACGAGTTA
AAGTCTAAAT CTGATGAAGA GAAAGACAAA CTCAAGGTTT TGTTAGAGCA AGTTGCGGTA
TCTAAGTAG
 
Protein sequence
MSHEPEYKDW QQIIELIRTS MDSEQDDMLL TMLMSRDERE SLISRVNIIN ELLKGELSQR 
QISQMLGVGI ATITRGSNEL KSKSDEEKDK LKVLLEQVAV SK