Gene VEA_004360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004360 
Symbol 
ID8558121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3052517 
End bp3053731 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content46% 
IMG OID646407482 
Productcysteine desulfurase 
Protein accessionYP_003286983 
Protein GI262395129 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.591204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGC CGATTTATCT TGATTATTCC GCTACATGTC CAGTTGATCC ACGTGTTGCT 
GAAAAAATGG TTCAGTACAT GACAATGGAT GGCACATTTG GCAACCCAGC GTCGCGTTCG
CACCGTTACG GCTGGCAGGC AGAAGAAGCG GTCGATACTG CTCGTGAGCA AATTGCTGAC
CTTCTAAATG CAGATCCTCG CGAAATCGTA TTTACATCTG GTGCGACAGA ATCAGACAAC
CTTGCTATTA AAGGTGCAGC GCACTTTTAC TCGAAGAAAG GCAAGCACGT AATCACTTGT
AAAACAGAGC ACAAAGCCGT TCTTGACCCA TGTCGTCAAC TTGAGCGTGA AGGCTTTGAA
GTGACTTACC TTGAGCCAGA ATCAAATGGC TTGATCGATC TAGAGAAGCT TAAAGCGGCA
ATGCGTGATG ACACAGTGCT TGTGTCTATT ATGCACGTAA ACAACGAGAT TGGTGTGGTT
CAAGACATTA CAGCGATCGG CGAATTGTGT CGTGAGCGTA AAATTGTTTT CCACGTGGAT
GCAGCGCAAT CTGCAGGTAA ATTACCAATC GACGTTCAAG AGATGAAAGT TGACCTAATT
TCGCTTTCTG CTCACAAAGT TTATGGCCCT AAAGGCATCG GTGCACTTTA CGTTCGTCGT
AAGCCTCGTA TTCGTCTTGA AGCGCAAATG CACGGTGGCG GCCATGAGCG TGGTTTCCGC
TCTGGTACAC TTCCTACCCA CCAAGTCGTT GGTATGGGTG AAGCATTCCG CATTGCAAAA
GAAGACATGC AAAAAGATTA CGATCACGCT TTAGCGCTTC GTAACCGTCT TTTTGATGGC
GTGAAAGACT TAGAAGCAGT GACGGTAAAC GGTGACCTTG AGCAACGTGT ACCACACAAC
CTAAACATCA GCTTCGCATT CGTAGAAGGT GAATCACTAC TAATGTCGCT TAAAGATCTA
GCGGTATCTT CTGGTAGTGC TTGTACGTCT GCAAGTCTTG AGCCTTCTTA CGTTCTTCGT
GCCCTAGGCA TGGATGATGA ATTGGCTCAC AGCTCGGTTC GTTTCTCGTT TGGTCGTTTC
ACGACTGAAG AAGAAATTGA TTACGCAATT GAACAAATCC GCGTTGCAGT GACTAAGCTA
CGCGACATGT CTCCTCTATG GGATATGTAC AAAGAAGGGA TTGATTTGAG CACTGTTGAA
TGGGCTCACC ATTAA
 
Protein sequence
MKLPIYLDYS ATCPVDPRVA EKMVQYMTMD GTFGNPASRS HRYGWQAEEA VDTAREQIAD 
LLNADPREIV FTSGATESDN LAIKGAAHFY SKKGKHVITC KTEHKAVLDP CRQLEREGFE
VTYLEPESNG LIDLEKLKAA MRDDTVLVSI MHVNNEIGVV QDITAIGELC RERKIVFHVD
AAQSAGKLPI DVQEMKVDLI SLSAHKVYGP KGIGALYVRR KPRIRLEAQM HGGGHERGFR
SGTLPTHQVV GMGEAFRIAK EDMQKDYDHA LALRNRLFDG VKDLEAVTVN GDLEQRVPHN
LNISFAFVEG ESLLMSLKDL AVSSGSACTS ASLEPSYVLR ALGMDDELAH SSVRFSFGRF
TTEEEIDYAI EQIRVAVTKL RDMSPLWDMY KEGIDLSTVE WAHH