Gene VEA_004357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004357 
Symbol 
ID8558118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3051130 
End bp3051645 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content47% 
IMG OID646407479 
Productchaperone protein HscB 
Protein accessionYP_003286980 
Protein GI262395126 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCACT TTGAATTATT TGGGCTACCA AGTCAGTTTA AGCTGGATGG TAGCCTTCTT 
TCTTCTCAGT TCCGAGAACT ACAAAAACGC TTCCACCCGG ATAACTTTGC AACGGGATCT
GAACGTGACC GTTTGATGGC GGTGCAAAAG GCAGCGCAAA TCAACGATGC CTATCAAGTT
CTGAAAAATC CTATCTCCCG TGCCGAGTAC ATCCTCGCAG AGCAGGGAGT TGAGATCCGA
GGTGAACAGC AGACAATGCA AGATCCAATG TTCTTAATGG AGCAAATGGA GCTGCGCGAA
GAACTGGAAG AAATTGCTGA CAGCACCGAT CCTGAATCGG CGCTTTTTGA CTTCGATTCT
AAGGTCAGCA AAATGTACAA ACAGCATCTG GCAAGCGTCG AGCAAGAGCT TGATGATGGT
CTTTGGGCTG AAGCCGCAGA CCGAGTTCGT AAGCTAAAAT TCATTGCCAA ACTAAAGAAC
GAAATTGAAC TAGTCGAAGA CAAACTCCTC GGCTAG
 
Protein sequence
MNHFELFGLP SQFKLDGSLL SSQFRELQKR FHPDNFATGS ERDRLMAVQK AAQINDAYQV 
LKNPISRAEY ILAEQGVEIR GEQQTMQDPM FLMEQMELRE ELEEIADSTD PESALFDFDS
KVSKMYKQHL ASVEQELDDG LWAEAADRVR KLKFIAKLKN EIELVEDKLL G