Gene VEA_004334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004334 
Symbol 
ID8558095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp3023677 
End bp3025281 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content47% 
IMG OID646407456 
Productconjugative transfer protein TrbL 
Protein accessionYP_003286957 
Protein GI262395103 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTATGTTTGG TAGTTTTTTC GTGGTCGTGA TTTTCCTGTT GCCTGGAGTA 
GCTGTTGCTG ATGAATTGAG CAGCAGCGGA GTTATGAATG ATGTGCTTAG CCGCTTTCAC
GGTGCTACAT CGATGTGGGG GCCCACGATT GAGGCAGCAG CAACTCGGCT TTTTTGGACG
TTAGTGATTA TTTCAATGGT GATTACTTTT GGGTTCATGT TGCTACGCAA AGCCGATATC
GGTGAGTTCT TCGCTGAATT CATACGCTTC ACTCTTTTTA CGGGTTTTTA CTGGTGGTTA
CTATCCAACG CTACGCATGG GATGAATATC GCGGGAACAA TTGTTGATTC ATTGCAACAA
CTTGGGGCTG ATGCCGGAGG GCTTAGCAGT AGTAAGCTCG GGCCATCGAG TATTTTAGAT
ATGGGGTTTG AGCTTTATGA CAAAACTGTC GAGGCTACTT CAGAACTCAG TTGGAGGCAG
TTCCCTACAG CATTAATGAT GGAACTTATG GCTTTAGCTG TGTTGGTTGT TTTGGCTATT
GTTTCTGTCA ACTTACTGCT TCTTTTAACG GCCAGTTGGA TACTGCTTTA TGCCGGGGTT
TTCTTTTTAG GCTTTGGAGG CTCTCGTTGG ACCTCTGACA TAGCAATTAA CTATTACAAA
GCCATATTAG GTTTGGCTGC TCAATTGCTG GCGATGGTGC TGATCGTTGC CATTGGTAAG
CAGTTTCTCG TGGATTATCA CAGCCAAATG AGTTCTGAGA ACATGGCAAG TCAAGAGCTG
GCCGTTATGT TGGTTATATC TCTGATTTTA CTGTTTTTGG TAGACAAGGT TCCCCCTATG
CTTTCCGGCT TGGTATCAGG TGGCAGTGTC GGTTCTACAG GAATTGGCTC ATTTGGTGCT
GGTGCTGCTG TAGGAGCTAC TATGACAGCA GCTAGTATGG GAATTTCAGG GGCTAAAATG
GCAGGCTCTG CGGTGTTGGG AGGTGCCGCA AATGCTGTTG GTGGAGCGAA TACCATCAAA
GCGGCTGTTA CTAAAGCCCA GTCTAGTTTG TCAGGGGAAG ATATGTCGAG CTTTAGTAGC
AGTAATTTTA ATGATACTAG CGAAAGCTCG GGTCGCGAGG GTTCGAGCAG CGACTACGCT
GGTACTGGAG AATCCCCATT TGCTCAAGCA GCAGGGTTTA GTCATGCTTC CTCTTTGGCT
GCTGGCACTG CAAGCGAATT GGCTAAAGGG GTGGGAGCAA AGGTAGCAGA GAAGTTTCAG
GACACAGTCA ACCAGACGGC AGGCGGTCGT TTGGCCACCT CCATACGCGA GAGTATGGAA
TCTAATGGCG ACAACAAAGA ATCCGTGGAG GGCAACTCTT CACTGTCCTT TGATAGCGAT
AGCTTGAGTG GTGACAATGG CGGCTGGATA AACAAAACTG GTGGCTTTGA TTCTCTGTCC
AGTGAAGATC AGGAGAAAGC TCGCCAATCA CACGCCGAAT GGCAAGAACG TGACCCAGAA
AAGCACGCTT CCAATGTCGA GGATTATGTT TCGTATGCCC AGGAACGCCA GCAGGAGCGC
AACGAAGAGG TTGCCAGCTT TGTTAAAAAA GGCTGTATGG CATAA
 
Protein sequence
MKNIMFGSFF VVVIFLLPGV AVADELSSSG VMNDVLSRFH GATSMWGPTI EAAATRLFWT 
LVIISMVITF GFMLLRKADI GEFFAEFIRF TLFTGFYWWL LSNATHGMNI AGTIVDSLQQ
LGADAGGLSS SKLGPSSILD MGFELYDKTV EATSELSWRQ FPTALMMELM ALAVLVVLAI
VSVNLLLLLT ASWILLYAGV FFLGFGGSRW TSDIAINYYK AILGLAAQLL AMVLIVAIGK
QFLVDYHSQM SSENMASQEL AVMLVISLIL LFLVDKVPPM LSGLVSGGSV GSTGIGSFGA
GAAVGATMTA ASMGISGAKM AGSAVLGGAA NAVGGANTIK AAVTKAQSSL SGEDMSSFSS
SNFNDTSESS GREGSSSDYA GTGESPFAQA AGFSHASSLA AGTASELAKG VGAKVAEKFQ
DTVNQTAGGR LATSIRESME SNGDNKESVE GNSSLSFDSD SLSGDNGGWI NKTGGFDSLS
SEDQEKARQS HAEWQERDPE KHASNVEDYV SYAQERQQER NEEVASFVKK GCMA