| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004300 |
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| Symbol | |
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| ID | 8558061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2984491 |
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| End bp | 2984976 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407422 |
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| Product | tmRNA-binding protein SmpB |
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| Protein accession | YP_003286923 |
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| Protein GI | 262395069 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AAAAAACGAA ACAAAAAGCG GGTAGCAATA CTATCGCGCT GAATAAAAAA
GCTCGCCACG AGTATTTCAT CGATGATGAA ATCGAAGCTG GCTTGGAGCT CCAAGGTTGG
GAAGTGAAAG CCCTTCGCCA AGGTAAAGCC AATATTTCTG AAAGTTACGT ATTTATGCGT
GACGGTGAAG CCTTTGTGAG TGGCATGACA ATCACTCCTT TAAATCAGGC ATCGACACAC
GTTGTGGCGA ACCCCACACG TGTGCGTAAA CTACTAATGA GTCGTCGTGA ACTAGACAAC
CTATTCGGAC GTGTGAACCG TGAAGGTATG ACATTAACGG CCCTTTCTCT GTACTGGTCT
CGCTCTTGGG TGAAACTAAA AATTGGCGTA GCAAAAGGTA AAAAGCTGCA CGATAAACGT
ACGGATTTAA AAGAAAAAGA CTGGGCAAGA GAGAAAGCAC GCGTCATGAA GAGTACACTG
CGTTAA
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| Protein sequence | MAKKKTKQKA GSNTIALNKK ARHEYFIDDE IEAGLELQGW EVKALRQGKA NISESYVFMR
DGEAFVSGMT ITPLNQASTH VVANPTRVRK LLMSRRELDN LFGRVNREGM TLTALSLYWS
RSWVKLKIGV AKGKKLHDKR TDLKEKDWAR EKARVMKSTL R
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