| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004287 |
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| Symbol | |
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| ID | 8558048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2971461 |
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| End bp | 2971967 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646407409 |
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| Product | type 4 fimbrial biogenesis protein FimT |
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| Protein accession | YP_003286910 |
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| Protein GI | 262395056 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCG GGTTTACGTT GTTGGAGCTT CTTATTACTG TTGCTGTCTT GTCAGTACTA
CTACTTTTTG TCGCCCCAAG TTTTTCAAAA GTTAGCCAAC ACATGAAAAT AGTGAATTTA
GCCAACGAAT TACAGGGTTT TTTGATCCAA GCGAAATCGG AATCGGTGAT GAGAAATCAA
GATTTGTCGG TTCATATTCA AGGCTTGCCT TCATCCACCG GAAGCTGGAA GCTCACACTC
TCGAGTGTAT CGAATGTCAC TGACATTACT TCAATGAATA CTGTTGCTGA GCTGCAAGGT
CATCTATATC GGGGTCTGGT GGTGTCGAGT AATATAACTA GCGTCAAGTT TGATCGTGTT
ATGGGGAATC CCAAAAATGC GGGAAGTATT CAGCTGAAGA AATCTCAAGC GGATACCAGT
CCGATAAAAG TAACTGTTCA TAACGGAGCA GGGCGAGTAA AAGTGTGCGC TATGAATGAG
GCAAAATATG GCTTTGAACA GTGCTAA
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| Protein sequence | MPRGFTLLEL LITVAVLSVL LLFVAPSFSK VSQHMKIVNL ANELQGFLIQ AKSESVMRNQ
DLSVHIQGLP SSTGSWKLTL SSVSNVTDIT SMNTVAELQG HLYRGLVVSS NITSVKFDRV
MGNPKNAGSI QLKKSQADTS PIKVTVHNGA GRVKVCAMNE AKYGFEQC
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