Gene VEA_004274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004274 
Symbol 
ID8558035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2954457 
End bp2954996 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID646407396 
ProductABC-type multidrug transport system ATPase and permease component 
Protein accessionYP_003286897 
Protein GI262395043 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG CAATTGCTAA AATTGGTGCA TTGACTGCTG TAGCAGTTTC ACTTTCAGGT 
TGCGTTGGCA GTAATGCCGT GACAGGTTAT GTCATGGGGT TTAACTTGAA AGCTGTAGAT
AACCGTTACG CTCGAGGTGG TCTAAACATG CTTTTAGCAC CTGTTTATGG TGTCGCAATC
GCGGCGGACT ACATCGTGTT TAACTCTCTA GAGTTTTGGA CGGGTAAGAA CCCTTTAAAT
GGTAAGCCAC ATATCTTCGA TACAAAGATG GATACTTACA TCGATGTAAA CCACCAGTTA
GATAAATCGT TAACGACGGC GCCAATTGCA CCGTTAGCGA ATAACCGTGT TATTGAGCAG
GGTCGAATGC AGCAAATCGA TGAGAATACT GTTCAAATGG ATATTACTTA CAATAACGGC
GAGAAGGCGA TACTCATGGG TGTGCGCGAT GGTGAGTTTG TCACTTACTA CATTGATGGC
GAAGTCGTTG CACAAACCTC AATGGATGAG CTAGCTGCTT ATACGCAAAA TCGCGTGTAA
 
Protein sequence
MKKAIAKIGA LTAVAVSLSG CVGSNAVTGY VMGFNLKAVD NRYARGGLNM LLAPVYGVAI 
AADYIVFNSL EFWTGKNPLN GKPHIFDTKM DTYIDVNHQL DKSLTTAPIA PLANNRVIEQ
GRMQQIDENT VQMDITYNNG EKAILMGVRD GEFVTYYIDG EVVAQTSMDE LAAYTQNRV