Gene VEA_004266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004266 
Symbol 
ID8558027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2944849 
End bp2945298 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID646407388 
Productribonucleotide reductase transcriptional regulator NrdR 
Protein accessionYP_003286889 
Protein GI262395035 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000298691 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CTTTTTGTTC CGAGAACGAT ACCAAAGTTA TTGATTCCCG CTTAGTGGCT 
GATGGCCATC AAGTTCGACG TCGCCGTCAG TGCTTGGCGT GTAGCGAGCG TTTTACTACG 
TTTGAAAGCG CAGAGTTAGT GATGCCTAAA GTGATCAAAT CGAATGGCAA CCGTGAACCA 
TTTGATGAAG ATAAAATGGT TGGCGGTATT CAGCGCGCAT TAGAGAAACG TCCAGTGAGT 
GCCGATTCTA TAGAGTTAGC GATCAGCATG ATCAAATCAC AACTGCGTGC GACGGGTGAA 
CGAGAGGTTC CGAGTGAAAT GATTGGTAAT TTAGTCATGG ACCAACTCAA AGAGCTCGAC 
AAGGTCGCTT ATATCCGTTT CGCCTCAGTT TACCGCAGCT TTGAAGACAT TCGCGAGTTT 
GGCGAAGAGA TTGCCCGCCT AGAAGACTGA
 
Protein sequence
MHCPFCSEND TKVIDSRLVA DGHQVRRRRQ CLACSERFTT FESAELVMPK VIKSNGNREP 
FDEDKMVGGI QRALEKRPVS ADSIELAISM IKSQLRATGE REVPSEMIGN LVMDQLKELD 
KVAYIRFASV YRSFEDIREF GEEIARLED