Gene VEA_004262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004262 
Symbol 
ID8558023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2941129 
End bp2941599 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID646407384 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_003286885 
Protein GI262395031 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000106153 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTGA TCGAGGGTGG CTTCCCAGCG CCAAATGCAA AAATTGCTAT CGTTATTTCT 
CGTTTCAACA GTTTTATTAA CGAAAGCCTA CTTTCTGGTG CGATCGATAC ACTAAAGCGT 
CACGGACAAG TAAGCGAAGA CAACATCACG GTTGTGCGTT GTCCAGGTGC CGTAGAACTA 
CCTCTAGTAG CTCAGCGTGT TGCTAAAACT GGCAAATTCG ACGCTATTGT TTCTCTAGGG 
TCTGTTATTC GCGGTGGAAC GCCTCACTTT GACTATGTTT GTAGTGAAAT GAACAAAGGT 
CTAGCACAAG TGTCTATGGA ATTCAGCATT CCAGTAGCAT TTGGTGTTTT GACTGTTGAT 
ACGATCGATC AAGCGATTGA ACGCGCAGGA ACCAAGGCTG GTAATAAAGG TGCAGAGGCT 
GCACTAAGCG CACTTGAAAT GATTAATGTA CTATCTGAAA TTGATTCCTA A
 
Protein sequence
MKVIEGGFPA PNAKIAIVIS RFNSFINESL LSGAIDTLKR HGQVSEDNIT VVRCPGAVEL 
PLVAQRVAKT GKFDAIVSLG SVIRGGTPHF DYVCSEMNKG LAQVSMEFSI PVAFGVLTVD 
TIDQAIERAG TKAGNKGAEA ALSALEMINV LSEIDS