Gene VEA_004261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004261 
Symbol 
ID8558022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2940662 
End bp2941129 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content45% 
IMG OID646407383 
Producttranscription termination protein NusB 
Protein accessionYP_003286884 
Protein GI262395030 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00012061 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGCCA GTGTGAAACC AGCCGCACGT CGTAACGCAC GTCAATTCGC TCTACAGGCG 
ATCTACTCAT GGCAAATTAC TAAAGAGAAT GTTGCCAAGA TTGAAGAACA GTTTTTGTCT 
GGCGACAAAT ACGATGAAGA AGAACTTCAT GCATCTGAGC CAGCGCTTGC TGCTCCAGAA 
ACAGACGTAG CTTACTTCCG TGAACTACTA AGCGGTGTTG TACTTAGCCA CGCTGAGCTA 
GATAGCAAAA TTCGTCCATA CATCTCTCGT CCTATGCAGG ATTTAGATAT GATGGAACTT 
GCTCTTCTTC GCCTTGCTAT GTACGAGATG ACTCGTCGCG AAGATGTTCC TTACAAAGTT 
GTTATCAATG AAGCGATTGA ACTTGCAAAA GTCTTCGCAG CAGAAGATAG CCACAAGTTT 
GTGAACGGTG TACTTGATAA AGCAGCACCT CACATTCGTA AGAAATAG
 
Protein sequence
MGASVKPAAR RNARQFALQA IYSWQITKEN VAKIEEQFLS GDKYDEEELH ASEPALAAPE 
TDVAYFRELL SGVVLSHAEL DSKIRPYISR PMQDLDMMEL ALLRLAMYEM TRREDVPYKV 
VINEAIELAK VFAAEDSHKF VNGVLDKAAP HIRKK