| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004257 |
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| Symbol | |
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| ID | 8558018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2936203 |
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| End bp | 2937087 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407379 |
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| Product | octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/ geranylgeranyl pyrophosphate synthetase |
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| Protein accession | YP_003286880 |
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| Protein GI | 262395026 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAGA CATTGACGTC TTTTCAACAA AGAAACAATC AGCAATTGAA CTTGTGGCTC
GATCAGCTTC CATATCAAGA GCAGCCATTG ATTCAAGCAA TGAAATACGG CCTTTTGCTA
GGTGGAAAAC GCGTTCGCCC TTTTCTTGTT TACATCACAG GTCAAATGCT CGGCTGTAAA
CCTGAAGACT TAGACACTCC TGCCGCTGCT ATCGAATGTA TACATGCCTA CTCACTCATT
CATGATGATC TGCCAGCCAT GGACGATGAT GAACTGCGTC GAGGTCAACC AACTTGTCAC
ATTAAGTTTG ATGAAGCAAC CGCAATACTG ACAGGTGATG CACTACAAAC TCTCGCCTTC
ACCATTATTG CCGATGGTCA ATTAAACCCG GCAGCCGAGA CTCAACGCAT CAACATGATC
AAAGCGTTGG CGCATTCTTC TGGCGCCAAC GGCATGTGTG TTGGGCAAGC CTTAGATTTA
GGCGCAGAAA ATCGCCAAGT TTCTCTTGAA GAAATGGAAG AGATACACCG TAAAAAAACC
GGAGCTCTGA TAGATTGTGC GGTAAAATTA GGTGCATTAG CTGCTGGTGA GAAAGGTATC
GAGGTTCTAC CTCACTTGGA GCGCTACTCA AAAGCAATTG GTTTGGCGTT TCAGGTTCAA
GACGATATTC TTGATATCAT CAGTGACACA GAAACACTGG GTAAGCCTCA AGGTTCCGAC
CAAGGTCTGA ATAAGAGCAC TTATCCTTCC CTGCTGGGTT TAGAGGGAGC CATAGAGAAA
GCTCACACTC TGTTACAGGA AGCACTTCAA GCATTGGAAG CTATCCCATA CAATACTCAG
TTACTCGAAG AGTTCGCCCG ATATGTCATC GAGCGCAAAA ATTAA
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| Protein sequence | MQQTLTSFQQ RNNQQLNLWL DQLPYQEQPL IQAMKYGLLL GGKRVRPFLV YITGQMLGCK
PEDLDTPAAA IECIHAYSLI HDDLPAMDDD ELRRGQPTCH IKFDEATAIL TGDALQTLAF
TIIADGQLNP AAETQRINMI KALAHSSGAN GMCVGQALDL GAENRQVSLE EMEEIHRKKT
GALIDCAVKL GALAAGEKGI EVLPHLERYS KAIGLAFQVQ DDILDIISDT ETLGKPQGSD
QGLNKSTYPS LLGLEGAIEK AHTLLQEALQ ALEAIPYNTQ LLEEFARYVI ERKN
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