Gene VEA_004254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004254 
Symbol 
ID8558015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2933952 
End bp2934899 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content48% 
IMG OID646407376 
ProductFlagellar motor rotation protein MotB 
Protein accessionYP_003286877 
Protein GI262395023 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.145815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATG AAGATAACAA ATGCGATTGT CCGCCACCCG GTCTCCCGTT ATGGATGGGG 
ACATTCGCGG ACTTAATGTC GCTACTGATG TGTTTCTTTG TTCTTCTGCT CTCGTTTTCT
GAGATGGACG TGCTGAAGTT CAAACAGATT GCGGGCTCAA TGAAATTTGC CTTCGGTGTA
CAAAATCAAC TTGAAGTGAA AGACATTCCC AAAGGTACCA GCATCATTGC TCAAGAGTTT
CGACCGGGCC GACCGGAACC AACGCCGATT GATGTCATCA TGCAGCAAAC CATGGACATC
ACTCAGCAGA CGCTCGAGTT TCATGAAGGG GAGTCTGACC GTGCTGGTGG CACAAAGCGT
GATGAAGGCA AGTTAACGGG GGGCCAATCG CCAGAAACGT CAACGCAAAA CAATCAATCT
GCAGAAGCGG ACATGCAACA GCAGCAATCT GAAGAGATGT CGCAAGAGAT GGAAACCTTG
ATGGAAAGCA TCAAGAAAGC CTTAGAGCGA GAGATTGAAC AAGGTGCCAT TGAAGTTGAA
AATCTTGGCC AACAGATTGT TATACGTATG CGTGAAAAAG GTGCATTCCC TGAAGGCTCG
GCCTTCTTAC AGCCTAAATT CCGTCCTTTA GTTCGACAAA TTGCAGAGTT AGTAAAAGAC
GTGCCAGGCA TTGTGCGAGT ATCTGGTCAC ACGGACAACC GACCGTTAGA CTCAGAGCTT
TATCGTTCTA ACTGGGATCT CTCCTCTCAG CGCGCCGTAT CGGTTGCACA AGAGATGGAG
AAGGTGAGAG GCTTCTCTCA TCAACGTTTG AGAGTGCGAG GCATGGCAGA TACTGAACCA
TTGTTGCCGA ATGATTCTGA TGAAAATCGC GCGCTTAACC GACGGGTTGA AATCAGCATC
ATGCAAGGCG AGCCACTATA CAGTGAAGAA GTGCCTGTAA TTCAATAA
 
Protein sequence
MDDEDNKCDC PPPGLPLWMG TFADLMSLLM CFFVLLLSFS EMDVLKFKQI AGSMKFAFGV 
QNQLEVKDIP KGTSIIAQEF RPGRPEPTPI DVIMQQTMDI TQQTLEFHEG ESDRAGGTKR
DEGKLTGGQS PETSTQNNQS AEADMQQQQS EEMSQEMETL MESIKKALER EIEQGAIEVE
NLGQQIVIRM REKGAFPEGS AFLQPKFRPL VRQIAELVKD VPGIVRVSGH TDNRPLDSEL
YRSNWDLSSQ RAVSVAQEME KVRGFSHQRL RVRGMADTEP LLPNDSDENR ALNRRVEISI
MQGEPLYSEE VPVIQ