Gene VEA_004253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004253 
Symbol 
ID8558014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2932292 
End bp2933689 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content47% 
IMG OID646407375 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_003286876 
Protein GI262395022 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000609097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAAGC GCTTCACAAA GATTTTAGAG TGCAACATTC GTAACATCAT TAAGAGCCGC 
ACGGAATCTG TCGCGGTATT CAACCGTCGT GATCACATTG AAGTGACCTC TGAGAGTAAC
GAATTCCACG CTGAAGTTCT TGAGGTTTTG ACTCATACAC CAGGCATTCA CCACGTACTG
GAAGTGAAGC AGACCGAATT TAAAGACTTG CACGATATCT TCGAACAAGT ACTGGAGCTA
AATCGCTCTG CACTCGAAAA TAAAACCTTT GTTGTACGTG CGAAGCGTCG CGGTAAGCAC
GACTTTACCT CTATCGAACT AGAGCGTTAT GTCGGCGGTG GTTTAAACCA AGCGATTGAG
AGCGCAAGAG TTAAGCTGCA AAACCCAGAC GTGACGATCA AGGTGGAAGT CTCGAACGAT
AAGCTAAACC AAGTGCTGGC TCGTCATAAA GGTCTAGGCG GCTTCCCACT GGGCACGCAA
GAAGACGTGC TGAGCTTGAT CTCTGGTGGT TTTGACTCTG GTGTTTCTAG CTATCTACAC
ATCAAACGTG GCTCAAAAGT ACACTACTGT TTCTTTAACC TAGGTGGTCC AGCGCACGAA
ATCGGCGTTA AGCAGGTTTC TCACTACCTA TGGAACAAAT ACGGCTCTTC AGCAAAAGTA
CGTTTCATCT CAGTTGATTT CGAACCTGTG GTTGCGGAAA TCCTAGAGAA AGTCGATGAC
GGCCAAATGG GGGTTATCTT GAAGCGTATG TTCATGCGTG CAGCAGGCAT GATCGCTCAG
AAGATGAAGA TCGAAGCATT GGTAACAGGC GAAGCGCTCG GTCAAGTATC GAGCCAAACG
CTAACTAACC TCCGCCATAT CGATAACGTA ACGGACACGT TGATTCTGCG CCCACTTATC
AACTGGGATA AAGAAGACAT CATTAACCTA GCACGCGAAA TCGGCACGGA AGACTTTGCG
AAGACTATGC CAGAGTATTG TGGTGTTATT TCTAAGAAGC CGACAGTAAA AGCGATTAAA
GCGAAGCTAG AAGCGGAAGA AGAGAAGTTT GACTTTAGCA TTCTTGAGCA AGTAGTTCGT
GATGCACGCA TGATGGACAT TCGTGATATC GCGAAAGAGT CTGAGCAAGC AGCACCAGAA
GTCGAGCAGG TTGAAGCGGT AGAAGAGCAC GCGGTTGTGC TAGATATTCG TAGTCCTGAA
GAGGAAGACG ATAACCCGCT CGAAATCGAA GGTGTGGATG TGAAACATAT CCCATTCTAC
AAGTTGGCTA CACAGTTTGG TGATTTAGAC CAATCTAAGA CATATCTATT GTACTGTGAC
CGTGGTGTGA TGAGCCGTCT GCAAGCACTT TACTTGCAAG AGCAAGGCTT CAATAACGTA
AAAGTTTACC GCCCATAG
 
Protein sequence
MRKRFTKILE CNIRNIIKSR TESVAVFNRR DHIEVTSESN EFHAEVLEVL THTPGIHHVL 
EVKQTEFKDL HDIFEQVLEL NRSALENKTF VVRAKRRGKH DFTSIELERY VGGGLNQAIE
SARVKLQNPD VTIKVEVSND KLNQVLARHK GLGGFPLGTQ EDVLSLISGG FDSGVSSYLH
IKRGSKVHYC FFNLGGPAHE IGVKQVSHYL WNKYGSSAKV RFISVDFEPV VAEILEKVDD
GQMGVILKRM FMRAAGMIAQ KMKIEALVTG EALGQVSSQT LTNLRHIDNV TDTLILRPLI
NWDKEDIINL AREIGTEDFA KTMPEYCGVI SKKPTVKAIK AKLEAEEEKF DFSILEQVVR
DARMMDIRDI AKESEQAAPE VEQVEAVEEH AVVLDIRSPE EEDDNPLEIE GVDVKHIPFY
KLATQFGDLD QSKTYLLYCD RGVMSRLQAL YLQEQGFNNV KVYRP