| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004246 |
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| Symbol | |
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| ID | 8558007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2924607 |
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| End bp | 2926163 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407368 |
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| Product | GGDEF domain family protein |
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| Protein accession | YP_003286869 |
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| Protein GI | 262395015 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATCCG ATATTCAGTC GCAGCTTCAT CAGCTGAGTT GTCAACTTGA CCAACTCAGA
CTGACACATC GTGATACTTC ACTCAAATTC AAACGTGAAC AACAAGTTCT TAAACGCGTT
GTGGCATCAT TGTCTTCAGC TTGCCAGGGT TCGAATACCC AGGTATCCAA TTACCTGTTT
GAAATCCAAC AAGAGCTGCA ACATCAAAAA GATATCAGTA CTCTTATCCC ACGTTTAGCG
GTATTAGAAA GAATGCTCAA ACAGCAGTCG AAGACGATGG ACAAACAGAA CGGCTACCTA
GACGAACAAA TCAAACACAG TGGTGAAACA CTCCAACGTG TAACAGGTTT ACCTGCGCAG
TTAAAACGTG AACTACGGAA CTTAATGAGT TTCTCAGAAG CTCATGCCAG CAATAAAGCC
GATCAAGCCA CTAAGCTACT GAGCATTTAC GAACGCGCTC TGAAAATCAT CACTTCCAAC
TCGCGTTTGC ATCTCAGTGA GTTTGAGAAT AATCCTGATA AGTCTCAACT TGAGTGCTTA
GCCAGCGATC TACAACATAC CATCACCGAG CTGGATTTTG AGGGAGAAAC GGGAGATCGA
TTGCTCGATA TTCGGGCTAA GCTGCTTCTT GGCGTGAGTG CAGAATCTCT CATTGAGCTT
ACGCTCTCAA CGCTGAAATT GGTTGTCGAA GCAACCAAGT TTGAGCGCGA AGCGTCTAGC
CAATTCCTTG ATCAGCTGAA CACTTCTCTC GCAAGTAACC TAAAAACCGT TCATCAGAAC
GTCGACCAAC ATCATACCTA CTTTGAGCAC CGCCAAGAGC TCAACACAGA AATGAACAGT
CTGGTTGAAT TGAGTCAACT ATCGCTCGAC CAAGCTCAAG ATCTAGCGGA TGTAAAAAAA
GAAGTCGCCC CGTTACTTGC GAAAATGGCG TCGCTGACAG AGCGACTTAA AATGACGGAA
GAACGAGAAC AAGCGCTGCA AGAGCGTTTG AATTACAGTA AGAACCAGCT CGAAGCCGTG
TTTGAAACCA CCCAAGATCA TCGTCGACGC TTAGATGACC AAGCTCAGCG CATGTTGCTA
GACCCTCTGA CTAAAGTCTA TAACCGCACC GCATTTAATG ATCGACTAGA GCTAGAGTAT
CGGCGTTGGA TTCGCTCTCA ACAGAATCTG CGTGTAGTGT TGTTTGACGT TGATAACTTC
AAAGCGGTGA ATGACAGCTA TGGCTATACG GCTGGTGATA AAGCGTTGAA GATCATCGCT
CGCACCATTA ATAAACGCGT ATCAGAAACT GAGACGGTAG CTCGCTTTGG TGGCGAAGAG
TTTATTTTAC TCGTTCCAGA ACAATCTGAA GAATACACAC TGGATCTCAT TAAACATATC
CAGCGTGATA TTAGCCAATT ACCATTTAAG TTCCGTGAGC AAAATATCAT GATCACCCTA
GCGGCTGTGT CGACATCTTT TAAAGAGTCC GATACGCCAG AGTATGTACT CGATCGACTC
GGCAAGATGC TTGCGGACGC TAAAAAACGT GGAACAAATC AGCTTAACTG GAGCTAG
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| Protein sequence | MESDIQSQLH QLSCQLDQLR LTHRDTSLKF KREQQVLKRV VASLSSACQG SNTQVSNYLF
EIQQELQHQK DISTLIPRLA VLERMLKQQS KTMDKQNGYL DEQIKHSGET LQRVTGLPAQ
LKRELRNLMS FSEAHASNKA DQATKLLSIY ERALKIITSN SRLHLSEFEN NPDKSQLECL
ASDLQHTITE LDFEGETGDR LLDIRAKLLL GVSAESLIEL TLSTLKLVVE ATKFEREASS
QFLDQLNTSL ASNLKTVHQN VDQHHTYFEH RQELNTEMNS LVELSQLSLD QAQDLADVKK
EVAPLLAKMA SLTERLKMTE EREQALQERL NYSKNQLEAV FETTQDHRRR LDDQAQRMLL
DPLTKVYNRT AFNDRLELEY RRWIRSQQNL RVVLFDVDNF KAVNDSYGYT AGDKALKIIA
RTINKRVSET ETVARFGGEE FILLVPEQSE EYTLDLIKHI QRDISQLPFK FREQNIMITL
AAVSTSFKES DTPEYVLDRL GKMLADAKKR GTNQLNWS
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