Gene VEA_004222 details

Gene Information

• Locus tag: VEA_004222
• ID: 8557983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2899073
• End bp: 2900989
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 646407344
• Product: penicillin-binding protein 2 (PBP-2)
• Protein accession: YP_003286845
• Protein GI: 262394991
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000026113
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCGTA AGCGCCGCAG TCAAATCCGA GATTATCAAG CCGAAGCGCG TCTGTTTGCC 
AGCCGCGCTA TTGTCGCTTT TATCGGCATT GTTCTCTTGA TGGGAGCTCT GGTCGCCAAT 
ATGTACAACA TTCAGGTGAA CCAGTTTCAA GATTATCAAA CCCGCTCGAA CGATAACCGT 
ATCAAAGTGG TTCCTATCGC GCCCAACCGA GGTCTGATTT ATGACCGAAA TGGTGTTTTA 
CTGGCTGAGA ACCGTCCCGT CTTTAACTTA GAACTGACTC CAGAAAAAAT TAAAGACATT 
GATGCAACCA TCCAAGAACT ACAAACCATT CTGGAAATTA CCCCAGATCA GATTGAACGT 
TTCCACCAAG AGCGTAAACG GACTCGTCGA TTTAAGTCAG TCCCACTGCT TACCCAACTG 
AACGAAAAAC AAGTAGCGGT ATTCTCCGTC AATCAGTACC GCTTTCCTGG TGTAGAAATA 
AGTGCGACCT TAAAGCGCTA TTACCCTTTC AGCGAAGTCT TAACCCACGT GATTGGTTAC 
GTTTCTCGAA TCAATGATCG CGACATGCAG CGCCTGATCC GTGAAGAAAA AGACGCAAAC 
TATCAAGCCA CTCGCGACAT TGGTAAGCTG GGTATCGAAA AATACTACGA AGACCTCTTA 
CACGGTACGG CCGGATATCA AGAAGTCGAG GTAAACAGCC GCGGCCGAGT AATTCGTACG 
TTAAAGTACG TTCCACCTGT ACCCGGAAAA GACATCGTTT TAAACCTTGA TATCAACTTG 
CAGCTGTACG TACACCAATT ATTGGATGGC CGCCGAGGCA GTGCTGTAGT GATCGATCCT 
AGAGACAACG GCGTACTGGC TATGGTTTCA AGCCCTAGCT ACGACCCTAA CTCGTTCGTG 
CACGGAATCT CGGGTAAAGA CTACCGCGCC CTTTTGAACG ATAAAAACCG TCCTTTGGTC 
AACCGTACTA CACTTGGCAT TTATCCACCC GCGTCTACCA TCAAACCATT TATGGCGGTA 
GCCGCGCTAC AAGAAGGTGT CGTCACACCG AACACTACGC GAAATGATCC AGGTTATTGG 
CGCATACCAA ATTCCAACAC ACGCCCATTC CGTGACTGGT TGCGTTGGGG ACACGGACGC 
GTCGATATCA TTAAGTCGAT CGAAGAGTCT GTTGATACCT TCTACTATCA AATCGCTTAT 
GACATGGGCA TTGACCGTAT TTCAAATTGG ATGATGATGT TCGGTTTTGG TGATTACACT 
GGCATCGATA TCTACGAAGA AAGTAAGGCG AATATGCCGA CTCGTGACTG GAAAATGTCT 
CGCCATAAAA CCCCGTGGTA CAAAGGCGAT ACGATCCCTG TGGGTATCGG CCAAGGTTAT 
TGGACAGCAA CACCAATGCA AATCGCCAAA GCGACCTCCG TATTAGTAAA TGAGGGAGAA 
GTTATCGCAC CTCACTTGCT CAAAGCGACG ATAGAGAACG GCAACGACTT CGAAGAACAA 
CAAACAACAG AATACGTGAC TTACCCGCCA ATCAAGAATG TACCGAAAAA GTACTGGGAT 
ATGGCGAAAG AAGGTATGCG TCGTGTAAAC CATGGCACGC GCGGAACAGC TCGACGCTCA 
TTCTACAAAA TGAGTTATCA AACAGCGGGT AAATCAGGTA CTGCACAGGT CTTCGGTCTG 
GGTGAAAACG AAGAGTACAA CGCAGATGAG ATCGCCGAAC ACTTACGTGA CCATGCGTTA 
TTTACTGGCT TTGCACCATT TGACGATCCA AAAGTGGTCG TCACTGTAGT GCTAGAAAAC 
GCTGGCGGTG GTTCTAGCAA CGGAGCCCCA GTAGTGAGAA AGATCTTTGA TCGAGTCGTA 
CTTGGCCCAG AAGAAATTGA GCCTGATAAC AATGCGAAGA AAGAGGTAAA ACAGTAA 

 

Protein sequence

MIRKRRSQIR DYQAEARLFA SRAIVAFIGI VLLMGALVAN MYNIQVNQFQ DYQTRSNDNR 
IKVVPIAPNR GLIYDRNGVL LAENRPVFNL ELTPEKIKDI DATIQELQTI LEITPDQIER 
FHQERKRTRR FKSVPLLTQL NEKQVAVFSV NQYRFPGVEI SATLKRYYPF SEVLTHVIGY 
VSRINDRDMQ RLIREEKDAN YQATRDIGKL GIEKYYEDLL HGTAGYQEVE VNSRGRVIRT 
LKYVPPVPGK DIVLNLDINL QLYVHQLLDG RRGSAVVIDP RDNGVLAMVS SPSYDPNSFV 
HGISGKDYRA LLNDKNRPLV NRTTLGIYPP ASTIKPFMAV AALQEGVVTP NTTRNDPGYW 
RIPNSNTRPF RDWLRWGHGR VDIIKSIEES VDTFYYQIAY DMGIDRISNW MMMFGFGDYT 
GIDIYEESKA NMPTRDWKMS RHKTPWYKGD TIPVGIGQGY WTATPMQIAK ATSVLVNEGE 
VIAPHLLKAT IENGNDFEEQ QTTEYVTYPP IKNVPKKYWD MAKEGMRRVN HGTRGTARRS 
FYKMSYQTAG KSGTAQVFGL GENEEYNADE IAEHLRDHAL FTGFAPFDDP KVVVTVVLEN 
AGGGSSNGAP VVRKIFDRVV LGPEEIEPDN NAKKEVKQ