| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004203 |
|---|
| Symbol | |
|---|
| ID | 8557944 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2876440 |
|---|
| End bp | 2877528 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646407305 |
|---|
| Product | peptide chain release factor 1 |
|---|
| Protein accession | YP_003286826 |
|---|
| Protein GI | 262394972 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0216] Protein chain release factor A |
|---|
| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0254288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCT CTATTCTGAC TAAGCTAGAA ACGCTAGTAG AACGTTACGA AGAAGTTCAA
CATCTTCTTG GTGATCCTGA TGTTATTGGA GATCAGGACA AATTCCGTGC TCTATCAAGA
GAGTACTCTC AGCTAGAAGA AGTAACCAAG TGCTTCCAAG CTTATCAACA AGCGCAAGAA
GATCTTGTCG CCGCTGAAGA GATGGCAAAC GAAGACGACG AAGAAATGCG TGAAATGGCG
CAAGAAGAAA TCAAAGAAGC GAAAGCGACT ATTGAGCGTC TTACTGATGA GCTACAGATT
CTTCTTCTGC CAAAAGATCC GAACGATGAT CGTAACTGTT TCCTAGAAAT TCGCGCAGGT
GCGGGTGGCG ACGAAGCGGG TATTTTCGCG GGTGACTTAT TCCGTATGTA CAGCAAGTAC
GCAGAAAAGC GTGGCTGGCG CATTGAGGTG ATGTCTTCAA ACGAAGCTGA ACACGGTGGT
TACAAAGAGA TGATCGCAAA AGTGAGCGGC GACGGTGCGT ACGGCGTACT GAAGTTTGAG
TCTGGTGGTC ACCGTGTGCA ACGTGTTCCT GCAACTGAAT CCCAAGGCCG TGTGCATACT
TCTGCATGTA CCGTAGCGGT GATGGCGGAA ATCCCAGAGG CGGATCTGCC AGAAATCAAA
GCAGCAGACC TGAAAATCGA TACGTTCCGT GCATCAGGCG CGGGTGGTCA GCACGTTAAC
ACCACGGATT CTGCAATCCG TATTACCCAC TTACCAACGG GTACGGTAGT AGAGTGTCAG
GACGAGCGTT CACAGCACAA GAACAAAGCG AAAGCGATGG CAGTTCTTGC TGCTCGTATC
GTTCAAGCGG AAGAAGAACG TCGTGCCGCA GAAGTGTCTG ATACACGTCG TAACCTTCTA
GGTTCTGGTG ACCGTAGTGA CCGTATTCGT ACATACAACT ACCCACAAGG TCGTGTGTCT
GATCACCGCA TCAACCTGAC TATCTACCGT TTGAACGAAG TGATGGAAGG TGACCTGCAG
AGCTTGATTG ATCCTGTGAT TCAAGAGCAC CAAGCAGACC AACTTGCGGC GCTCGCAGAG
AACGGCTAA
|
|---|
| Protein sequence | MKASILTKLE TLVERYEEVQ HLLGDPDVIG DQDKFRALSR EYSQLEEVTK CFQAYQQAQE
DLVAAEEMAN EDDEEMREMA QEEIKEAKAT IERLTDELQI LLLPKDPNDD RNCFLEIRAG
AGGDEAGIFA GDLFRMYSKY AEKRGWRIEV MSSNEAEHGG YKEMIAKVSG DGAYGVLKFE
SGGHRVQRVP ATESQGRVHT SACTVAVMAE IPEADLPEIK AADLKIDTFR ASGAGGQHVN
TTDSAIRITH LPTGTVVECQ DERSQHKNKA KAMAVLAARI VQAEEERRAA EVSDTRRNLL
GSGDRSDRIR TYNYPQGRVS DHRINLTIYR LNEVMEGDLQ SLIDPVIQEH QADQLAALAE
NG
|
|---|
| |