Gene VEA_004197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004197 
Symbol 
ID8557938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2871028 
End bp2871501 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content48% 
IMG OID646407299 
Producttranscriptional regulator 
Protein accessionYP_003286820 
Protein GI262394966 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.136904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCGG CCATTAATCT TGCGAAAAAG AAAAAAATTC CACACACGAT TCATCTGTAT 
GAGCACGACC CTAGAGCCGA TAGTTATGGC TTGGAGGCTG CTGAAGTACT GGGGCAGGAT 
CCGAAAACAG TATTTAAAAC CTTGCTGTTC TGCTTGAACG GCGAGCCAAA GAACCTTGCG 
GTTGCGATTA TCCCTGTTGA TCAAAAGCTG AACCTAAAAC TGGCAGCGAA AGCAGCGAAG 
GGCAAAAAGG CCGATATGGC TGATCCGGAA ATCGCGCAAA AGACCACAGG TTATGTTGTT 
GGTGGGATTA GCCCACTGGG GCAGAAGAAA GCCTTACCTA CTTTTTTGCA CGAAAGCGCA 
GCAGAGCAAG ACACAATCTG TGTAAGCGCA GGGAAGAGAG GCTTAGAGAT TGAACTCGCC 
CCGAAAGATT TGCTTGGATT AACTCGTGGT CAGTTTGCAC CCCTTTGTTT GTAA
 
Protein sequence
MTPAINLAKK KKIPHTIHLY EHDPRADSYG LEAAEVLGQD PKTVFKTLLF CLNGEPKNLA 
VAIIPVDQKL NLKLAAKAAK GKKADMADPE IAQKTTGYVV GGISPLGQKK ALPTFLHESA 
AEQDTICVSA GKRGLEIELA PKDLLGLTRG QFAPLCL