| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004181 |
|---|
| Symbol | |
|---|
| ID | 8557920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2851439 |
|---|
| End bp | 2852572 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646407281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003286804 |
|---|
| Protein GI | 262394950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATTAAACAG TCTGTTTTTA ATCACTTTAG TGATGCTTGT GCCTTTTAAA
GTAATGGCAT CTTGGTATGA AGTAACAGGC GTTGCCACTA TCGTTTCTTC AGAAGAGACG
GCAAGGCTCC ATGCGTTGGA AGACGCGCTG TTCAAAGCCG TCAATTTTTC GGGCGCAGAT
ATTGGCAGTA TTAGCAATTT GATGCCGCTG TTAGAGGAAA GCCGTAACGA GTACCAGTTT
ACCAACCATG AAGTCCGTTA CATTTTGGTC GAGTCTGAGC GTAAACGTCG AGGTAAAGTC
GAGGTAAAAA TTCGCGTCGA TATTTATCCA TCGGCAACGG GTTGCCACAC CGATCAATAC
AAAAAGACGA TCCTTGTCGG CAATATTGAG GTTGCCTCAC CACAACAAGC GGTGATGGGA
CAGATTTACC AAGTGGGTGA CGATTTTAGC CGCGTGGTGA ATCGCCAGCT GGATCAAACC
TCTCGCAGCT TTGTGTCTGT GGGTACAACG GACTATTCAA TTAGCAGTAA CTATCCCGCT
CGTACTCAAA TGATCGCGCA AGACAACGGC GCACAATACA TCATTGGGGG AGTCATTACC
GATCTCACTG CGACGGTCGA ATCTCAACTA CTGCAAGATG ACATCATCAA TCGTCAGTTT
GCGTTAGAGA TGAAAGTATT TGATGGTAAA ACTGGCCATG AAGTCTTCAA CAAAGCCTAC
CGTGAAGTGG CGCGTTGGCC ATTTGCCAAA ACGAGCCAAG TGGATACTCG CAGTGCGCGC
TTTTGGGCGT CGACCTATGG CGAGATGATG CTACGCGTTA GTCGCAATAT AATGCTGGAT
CTAGAGTCAG AGCTGTCTTG CAAAATTACG CTGCCAGAGG TCATCGCAGT CTTCGGCAAT
ACGGTAACGA TGGATCTCGG CCGTATGCAT GGCGTAAAAG AGGGAGACAA ATTGCAACTT
TGGCACACCG CATCATTTAT CGACCAAAAC GGATTACCAA GAAATAAAGT ATCGCAAAGT
GAAATTACAT TGACGGTATC ACGTATATAC GAACACGAAG CCGAGCTGAC GATTGATCAG
CCAAATTTAG CGTCTAGTGT TCAAATTGGC GACGTAATGA ACAAGATCCT ATAA
|
|---|
| Protein sequence | MKKILNSLFL ITLVMLVPFK VMASWYEVTG VATIVSSEET ARLHALEDAL FKAVNFSGAD
IGSISNLMPL LEESRNEYQF TNHEVRYILV ESERKRRGKV EVKIRVDIYP SATGCHTDQY
KKTILVGNIE VASPQQAVMG QIYQVGDDFS RVVNRQLDQT SRSFVSVGTT DYSISSNYPA
RTQMIAQDNG AQYIIGGVIT DLTATVESQL LQDDIINRQF ALEMKVFDGK TGHEVFNKAY
REVARWPFAK TSQVDTRSAR FWASTYGEMM LRVSRNIMLD LESELSCKIT LPEVIAVFGN
TVTMDLGRMH GVKEGDKLQL WHTASFIDQN GLPRNKVSQS EITLTVSRIY EHEAELTIDQ
PNLASSVQIG DVMNKIL
|
|---|
| |