Gene VEA_004177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004177 
Symbol 
ID8557916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2849310 
End bp2849624 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID646407277 
Productnegative regulator of flagellin synthesis FlgM 
Protein accessionYP_003286800 
Protein GI262394946 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTA TAGATAATAT ACGTTCAGGG CAAATGATGA CGACGACAAG TCGTGCACCT 
GCGCGTAACG ATTCCAATGC TACCAGCACG ACTGAATCGA AAAAAGCACC CGCACAACAA
GACGCTGTAT CACTCAGCCA GCAAAGCAAA GCCGTTAGCA AACTCCAAAA AGATATGGCA
GCTTCTCCGG CCTATGACAG CGCCAAAGTG GCGGCAATCA AAGAAGCAAT CACAAACGGT
TCATACAAAG TCGATCCTGA AAAATTGGCC GACAACATGA TTAAGTTTGA AAACGAATTG
CAAGGCAAAA GCTAA
 
Protein sequence
MAGIDNIRSG QMMTTTSRAP ARNDSNATST TESKKAPAQQ DAVSLSQQSK AVSKLQKDMA 
ASPAYDSAKV AAIKEAITNG SYKVDPEKLA DNMIKFENEL QGKS