| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004174 |
|---|
| Symbol | |
|---|
| ID | 8557913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2846605 |
|---|
| End bp | 2847432 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646407274 |
|---|
| Product | chemotaxis protein methyltransferase CheR |
|---|
| Protein accession | YP_003286797 |
|---|
| Protein GI | 262394943 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTA TTACAATCAG TGATCAAGAG TATCGTGACT TTAGCCGTTT TCTAGAATCG
CAATGTGGCA TCGTGTTAGG TGATAGCAAG CAATACCTTG TGCGTAGCCG ACTGAGTCCT
TTAGTGACGA AGTTTAAGCT CGCATCGTTA TCAGATTTGC TACGTGATGT TGTTACAGGG
CGCAATCGTG AATTACGAGT GGCCGCTGTG GACGCGATGA CGACTAACGA AACCTTGTGG
TTTCGAGATA CTTATCCGTT CACAGTTTTA GCTGACAAAT TATTGCCAGA AGTAGCGGCA
AGCAAGCGCC CAATCAAGAT CTGGTCTGCA GCCAGTTCAT CGGGCCAAGA GCCGTATTCT
ATTGCAATGA CGATTCTGGA AACGCAACAG CGCAAGCCGG GTTTGTTACC AAACGTGTCT
ATTACAGCAA CAGACATTTC AGCAAGTATG CTCGAGATGT GTCGTGCAGG TGTGTATGAC
AATTTGGCTC TAGGGCGCGG ACTTTCACCA GAACGTCGCC GCACCTTCTT TGAGAATGCG
GACGGTGGCC GTATGAAAGT CAAAGACAAC GTCAAACGTT TGGTGAACTT TCGTCCACAA
AACTTGATGG ACAGTTATGC ACTGATGGGT AAGTTCGACA TTATTTTTTG TCGCAACGTG
CTGATTTACT TCTCACCGGA AATGAAATCA AAAGTGCTTA ACCAAATGGC GAGCAGCTTA
AACCCAGGTG GTTATCTGCT GTTAGGGGCA TCAGAGTCGC TAACTGGTCT GACTGATAAA
TTTGAAATGG TGCGCTGTAA CCCGGGTATC ATTTACAAGC TTAAATAG
|
|---|
| Protein sequence | MTAITISDQE YRDFSRFLES QCGIVLGDSK QYLVRSRLSP LVTKFKLASL SDLLRDVVTG
RNRELRVAAV DAMTTNETLW FRDTYPFTVL ADKLLPEVAA SKRPIKIWSA ASSSGQEPYS
IAMTILETQQ RKPGLLPNVS ITATDISASM LEMCRAGVYD NLALGRGLSP ERRRTFFENA
DGGRMKVKDN VKRLVNFRPQ NLMDSYALMG KFDIIFCRNV LIYFSPEMKS KVLNQMASSL
NPGGYLLLGA SESLTGLTDK FEMVRCNPGI IYKLK
|
|---|
| |