Gene VEA_004172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004172 
Symbol 
ID8557911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2845482 
End bp2845895 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID646407272 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_003286795 
Protein GI262394941 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTAT TTAACGTTTT CAATGTGACA GGTTCCGCAA TGAGCGCTGA ATCCGTTCGT 
CTGAACACTA CCTCAAGCAA CTTGGCGAAC GCCGACAGTG TCAGCAGCTC TGCGAAAGAC
ACTTATAAAG CGCGCCATGC TGTGTTTGGT GCTGAGTTAA GTAACGCCAT GCGTGGCGGT
GATACGGTGC CAGTGAAAGT GATGGGTATT GTAGAAAGCG ATAAACCGCT GAGTGCGGAG
TACAACCCAG ACCATCCCCT TGCAAACGAA GAAGGCTACA TCTACAAGCC GAACGTGAAT
GTAATGGAAG AAATGGCGAA CATGATTTCA GCTTCTCGCG CATACCAAAC TAATGTGCAA
GTAGCTGATT CTAGTAAACA AATGCTGCTG CGTACGCTGC AGATGGGTCA ATAA
 
Protein sequence
MSLFNVFNVT GSAMSAESVR LNTTSSNLAN ADSVSSSAKD TYKARHAVFG AELSNAMRGG 
DTVPVKVMGI VESDKPLSAE YNPDHPLANE EGYIYKPNVN VMEEMANMIS ASRAYQTNVQ
VADSSKQMLL RTLQMGQ