| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004158 |
|---|
| Symbol | |
|---|
| ID | 8557897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2828471 |
|---|
| End bp | 2830195 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646407258 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase of PTS system |
|---|
| Protein accession | YP_003286781 |
|---|
| Protein GI | 262394927 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000102592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAG GCATCCTAGC ATCTCCTGGT ATTGCAATCG GTAAAGCACT ACTACTTCAA
GAAGATGAAA TTGTCCTAAA CACAAACACT ATTTCTGACG ATCAAGTAGA AGCTGAAGTT
CAGCGTTTCT TCGACGCTCG TAACAAATCT GCAGCTCAGC TAGAAACTAT CAAGCAAAAA
GCGCTTGAAA CGTTTGGTGA AGAAAAAGAA GCGATCTTTG AAGGTCACAT CATGCTTCTT
GAAGACGAAG AGCTAGAAGA AGAGATCCTA GCACTTATCA AAAACGACAA GATGACTGCG
GATCACGCTA TCCACTCAGT TATCGAAGAG CAAGCATGTG CTCTTGAGTC ACTAGATGAC
GAATACCTAA AAGAACGTGC AACTGACATC CGCGATATCG GTTCTCGTTT TGTGAAAAAC
GCACTGGGTA TCAACATTGT TTCGCTTAGC GACATCAATG AAGAAGTTAT CCTAGTTGCT
TACGACCTAA CGCCATCTGA AACGGCACAG ATTAACCTAG ACTACGTACT TGGTTTTGCT
TGTGATATCG GCGGTCGTAC ATCTCACACT TCAATCATGG CTCGCTCTCT TGAGCTTCCT
GCTATCGTTG GTACTAACGA CATCACGAAA AAAGTTAAGA ATGGCGATAT GCTGATTCTT
GACGCGATGA ACAACAAGAT TGTTGTTAAC CCATCAGAAG CTGAACTAGA AGAAGCGAAA
GCGGTTAAAG CGGCATTCCT AGCTGAAAAA GAAGAGCTAG CGAAACTGAA AGACCTACAC
GCAGAAACGA CTGACGGTCA CCGTGTAGAA GTTTGCGGTA ACATCGGTAC AGTGAAAGAC
TGTGACGGTA TCCTCCGTAA CGGCGGTGAA GGTGTTGGTC TGTACCGTAC TGAATTCCTA
TTTATGGACC GTACTGCACT TCCAACTGAA GAAGAACAGT ACCAAGCGTA CAAAGAAGTT
GCGGAAGCAA TGAACGGTCA AGCTGTGATC ATCCGTACTA TGGATATCGG CGGCGATAAA
GATCTCCCAT ACATGGATCT TCCAAAAGAG ATGAACCCAT TCCTAGGCTG GCGCGCTGTA
CGTATCAGTC TGGATCGTCG TGAAATCCTT CGTGATCAGC TACGTGGCAT CCTACGTGCT
TCTGCACACG GCAAACTGCG TATTATGTTC CCAATGATCA TCTCTGTCGA AGAAATCCGT
GAGCTTAAGA AAGCGATCGA AGAGTACAAA GAAGAGCTAC GTGCTGAAGG CCACGCGTTT
GACGAAAACA TCGAAATCGG TGTTATGGTT GAAACTCCTG CTGCTGCTGC GATCGCACAC
CACTTAGCGA AGGAAGTGTC TTTCTTCTCT ATCGGTACAA ACGACCTAAC TCAGTACACG
CTAGCGGTAG ACCGTGGTAA CGAGATGATC TCTCATCTTT ACAACCCACT ATCACCAGCA
GTACTAACCG TGATCAAGCA AGTTATTGAC GCTTCTCACG CAGAAGGTAA ATGGACTGGT
ATGTGTGGTG AACTTGCAGG TGACGAGCGT GCAACGCTTC TACTTCTAGG TATGGGTCTG
GACGAGTTCT CAATGAGCGG CATTTCAATC CCTAAAGTGA AGAAAGTAGT TCGTAACTCT
AACTTCGCAG AAGTGAAAGC AATGGCTGAA GAAGCCCTTT CTTTACCAAC AGCTGCAGAA
ATCGAAGCAG TGGTAGAAAA GTTTATTGCT GAGAAAGCTC AGTAA
|
|---|
| Protein sequence | MISGILASPG IAIGKALLLQ EDEIVLNTNT ISDDQVEAEV QRFFDARNKS AAQLETIKQK
ALETFGEEKE AIFEGHIMLL EDEELEEEIL ALIKNDKMTA DHAIHSVIEE QACALESLDD
EYLKERATDI RDIGSRFVKN ALGINIVSLS DINEEVILVA YDLTPSETAQ INLDYVLGFA
CDIGGRTSHT SIMARSLELP AIVGTNDITK KVKNGDMLIL DAMNNKIVVN PSEAELEEAK
AVKAAFLAEK EELAKLKDLH AETTDGHRVE VCGNIGTVKD CDGILRNGGE GVGLYRTEFL
FMDRTALPTE EEQYQAYKEV AEAMNGQAVI IRTMDIGGDK DLPYMDLPKE MNPFLGWRAV
RISLDRREIL RDQLRGILRA SAHGKLRIMF PMIISVEEIR ELKKAIEEYK EELRAEGHAF
DENIEIGVMV ETPAAAAIAH HLAKEVSFFS IGTNDLTQYT LAVDRGNEMI SHLYNPLSPA
VLTVIKQVID ASHAEGKWTG MCGELAGDER ATLLLLGMGL DEFSMSGISI PKVKKVVRNS
NFAEVKAMAE EALSLPTAAE IEAVVEKFIA EKAQ
|
|---|
| |