| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004156 |
|---|
| Symbol | |
|---|
| ID | 8557895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2826804 |
|---|
| End bp | 2827772 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646407256 |
|---|
| Product | cysteine synthase |
|---|
| Protein accession | YP_003286779 |
|---|
| Protein GI | 262394925 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000187133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA TCTACGAAGA TAACTCTCTT ACTATCGGTA ATACACCTCT CGTTCGTCTA
AACAAAGTAA GCAAAGGCAA AGTTCTCGCG AAAATTGAAG CGCGTAACCC TAGCTTCAGT
GTTAAGTGCC GTATCGGTGC AAACATGATT TGGGAAGCAG AGAAAGCGGG GCTTCTTAAG
CCAGGTGTAG AGCTTGTAGA GCCTACCAGT GGTAACACAG GTGTTGCTCT AGCATTCGTA
GCGGCCGCTC GCGGTTACAA GCTAACATTG ACCATGCCTG AATCAATGAG CCTAGAACGC
CGTAAGCTAC TTAAAGCACT GGGCGCTAAC CTTGAGCTGA CTGAAGCGGC GAAAGGCATG
AAAGGGGCGA TTGCTAAAGC AGAAGAAATC GTAGCAAGCA ACCCTGAGAA GTACCTACTT
CTTCAACAAT TTGACAACCC TGCGAACCCA GAGATCCACG AAAAGACTAC GGGCCCTGAG
ATTTGGGAAG CGACAGACGG TGAAATCGAC GTATTCGTTG CTGGTGTCGG TACGGGCGGT
ACTATCACAG GTACAAGCCG TTACATCAAA GGTGAAAAAG GCAAAGCCAT CACTTCTGTC
GCAGTTGAGC CAGCAGAGTC TCCAGTTATT GCACAAGCAC TTGCTGGCGA AGAAATTCAA
CCTGCTCCGC ACAAAATCCA AGGTATCGGT GCTGGTTTCA TCCCAGGTAA CCTCGATTTA
GACATTATTG ACCGCGTTGA GCAAGTCACC TCAGAAGAAG CGATTGAGAT GGCTCGTCGC
CTAATGGAAG AGGAAGGTAT CCTAGCTGGT ATCTCATCTG GTGCGGCTGT TGTTGCAGCC
AACCGACTTG CAGAACTCCC TGAATTTGAA GGAAAAACAA TTGTAACCGT TCTACCAAGT
TCAGGTGAGC GTTACCTAAG CACAGCACTC TTTGCAGGTA TCTTTACCGA AAAAGAGAAC
CAACAATAA
|
|---|
| Protein sequence | MSKIYEDNSL TIGNTPLVRL NKVSKGKVLA KIEARNPSFS VKCRIGANMI WEAEKAGLLK
PGVELVEPTS GNTGVALAFV AAARGYKLTL TMPESMSLER RKLLKALGAN LELTEAAKGM
KGAIAKAEEI VASNPEKYLL LQQFDNPANP EIHEKTTGPE IWEATDGEID VFVAGVGTGG
TITGTSRYIK GEKGKAITSV AVEPAESPVI AQALAGEEIQ PAPHKIQGIG AGFIPGNLDL
DIIDRVEQVT SEEAIEMARR LMEEEGILAG ISSGAAVVAA NRLAELPEFE GKTIVTVLPS
SGERYLSTAL FAGIFTEKEN QQ
|
|---|
| |