| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004153 |
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| Symbol | |
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| ID | 8557892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2822585 |
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| End bp | 2824657 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407253 |
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| Product | DNA ligase |
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| Protein accession | YP_003286776 |
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| Protein GI | 262394922 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0490058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCCT TTTTCTTGGA TTTCCCAACC TCACCGATTG AAAATACACG GGGCTTTACT
ATGTCTGAAT CAGTACTTCA GCGATTAGAA GAACTAAAAG AGTCGTTGCA TTACCACGCT
GTGCGTTACT ACGTGGAAGA TAACCCAGAG ATCCCTGATG CCGAGTACGA CCGTTTAATG
CGAGAGCTCC TGGATATTGA AGCTGAGAAC CCTGATTTAA TTACCGTAGA TTCACCAAGT
CAACGTGTCG GTGGACAACC TCTCTCTGCG TTTAGCCAAG TGACACATGA AGTACCGATG
CTTTCGCTTG ATAATGCGTT TGATGACAGC GAACTTGATA GTTTCCATAA GCGAGCACAA
GAGCGGGTGG GCAGTCAGAG TGTAAAAGAA TACTGTTGTG AGCCGAAATT GGATGGACTC
GCAGTTAGTT TACTGTATGA GAACGGAGTG TTAGTGCAGG CGGCAACACG AGGTGATGGC
ACTACCGGCG AGAACATCAC AGAGAATGTT CGCACGATTA AAGCCATTCC TTTAAAACTC
AGAGGTAATG ACTGGCCAAA TCGTCTTGAA GTTCGTGGTG AAGTCTTTAT GCCGAAAGCT
GGGTTTGAAA AGCTCAATGA ATTAGCAAGG AAGAAAGGCG AAAAAATCTT TGTCAACCCA
CGTAACGCTG CGGCTGGTAG CTTACGACAA TTGGATTCAC GCATTACGGC TTCTCGTCCG
CTTAGCTTTT ATGCATACAG TGTGGGCGTG GTGCAAGGCG CTGAATTGGC GGCAAGTCAC
TACGAACGCT TCTTGCAAAT TAAATCTTGG GGATTACCAA TGTGCCCGGA GACCAAGCGA
GTTGAAAGCT TGGCAGATGT AAAAGCTTAC TACCAAGATA TCTTGCAGCG TCGTGATGCC
CTTCCTTATG AGATCGATGG TGTCGTCATT AAAATTGACG ATATTGCCGT GCAAGAGCGT
CTTGGATTTG TTGCTCGCGC TCCACGTTGG GCGATTGCCT ACAAATTCCC GGCTCAGGAA
GAAATGACGA CGTTGAATGA GGTGGAATTC CAAGTCGGTC GTACTGGTGC GATTACACCT
GTTGCTAAAC TAGAGCCTGT ATTTGTTGGC GGGGTAACGG TAAGTAATGC GACGCTTCAT
AACGCAGATG AGATAGAACG TCTGCAAGTT AAGATCGGTG ATCACGTTGT GATTCGTCGA
GCGGGTGATG TTATTCCTCA AGTCGTTTCT GTCATCAAAG AGCGTCGACC AGAAACAGCG
CGAGATATTA TTTTTCCAAC TCAGTGTCCT GTTTGTGGTT CGCATGTTGA ACGAATCGAA
GGAGAGGCGG TAACACGTTG TACGGGTGGC TTAGTTTGCC AAGCCCAACG TAAACAAGCG
CTAAAACACT TTGTGTCTCG TAAAGCGTTA GACGTTGACG GTCTAGGCGA TAAAGTGATC
GAGCAACTTG TTGACCGTGA GATGGTGAAA ACTCCTGCTG ACTTATTTAA GTTATCTGCG
GGGATTTTAA CGGTATTAGA TCGCATGGGG CCAAAGTCTG CGCAGAACAT TGTGAATGCG
TTAGAAAAAT CAAAAGAGAC AACGTTACCT CGCTTTTTGT ATTCGCTTGG GATTCGTGAA
GTTGGCGAGG CAACCGCCGC AAACCTAGCA ATGCACTTTA AAACGTTGGA AGCCATCCAA
AATGCTAACG AAGAGCAGTT AATTGAAGTG CAAGACATCG GTGCTGTGGT TGCTCAACAT
ATTACGACTT TCTTCAGTGA AGAGCAGAAC CAAGCAGTGG TTAAAGATTT GCTTGAACAA
GGGATCCACT GGCCAGAGAT TAATACGACT GAGCAGGTAG GAGAGCTACC GTTAGAAGGT
AAGACAGTTG TATTGACAGG AACACTTTCT CAATTAGGTC GCACAGAGGC TAAAGAAGCC
CTCCAATCCC TAGGTGCAAA AGTGACAGGT AGTGTTTCTA AGAAAACGGA TATTTTGTTT
GCTGGTGAAA ATGCAGGTTC GAAGTTGGCA AAGGCACAAG AACTGGGTAT CGAGATCAAA
ACAGAACAAG ACTTACTCGA GTTGATGAAT TAA
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| Protein sequence | MEPFFLDFPT SPIENTRGFT MSESVLQRLE ELKESLHYHA VRYYVEDNPE IPDAEYDRLM
RELLDIEAEN PDLITVDSPS QRVGGQPLSA FSQVTHEVPM LSLDNAFDDS ELDSFHKRAQ
ERVGSQSVKE YCCEPKLDGL AVSLLYENGV LVQAATRGDG TTGENITENV RTIKAIPLKL
RGNDWPNRLE VRGEVFMPKA GFEKLNELAR KKGEKIFVNP RNAAAGSLRQ LDSRITASRP
LSFYAYSVGV VQGAELAASH YERFLQIKSW GLPMCPETKR VESLADVKAY YQDILQRRDA
LPYEIDGVVI KIDDIAVQER LGFVARAPRW AIAYKFPAQE EMTTLNEVEF QVGRTGAITP
VAKLEPVFVG GVTVSNATLH NADEIERLQV KIGDHVVIRR AGDVIPQVVS VIKERRPETA
RDIIFPTQCP VCGSHVERIE GEAVTRCTGG LVCQAQRKQA LKHFVSRKAL DVDGLGDKVI
EQLVDREMVK TPADLFKLSA GILTVLDRMG PKSAQNIVNA LEKSKETTLP RFLYSLGIRE
VGEATAANLA MHFKTLEAIQ NANEEQLIEV QDIGAVVAQH ITTFFSEEQN QAVVKDLLEQ
GIHWPEINTT EQVGELPLEG KTVVLTGTLS QLGRTEAKEA LQSLGAKVTG SVSKKTDILF
AGENAGSKLA KAQELGIEIK TEQDLLELMN
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