Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004150 |
Symbol | |
ID | 8557889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2818440 |
End bp | 2819357 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407250 |
Product | stomatin family protein |
Protein accession | YP_003286773 |
Protein GI | 262394919 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATTG ATTCACTGAT TACCATCGGT ATTTTCGTCG TTCTTGCTGT AGTTATCTTA TCTTCAGCCA TTAAGACGGT GCCACAAGGA AATAACTGGA CAGTCGAACG CTTCGGACGC TACACCCATA CGCTAAAACC CGGCTTAAAC TTGATCATTC CATTTGTTGA TAAGATAGGG CAAAAAGTCA ACATGATGGA GCGCGTTCTT GATATTCCAG CGCAAGAAGT TATTTCAAAA GACAACGCTA ACGTGGTTAT TGATGCGGTC GGATTTGTTC AAGTCATCGA TGCTGCCAAA GCGGCTTATG AAGTCAACGA TTTGGAACAT GCCATTAGAA ATTTAACTCT CACCAATATC CGTACCGTTT TAGGCTCAAT GGAGTTGGAC GAAATGCTGA GTCAGCGTGA CATGATCAAC TCCAAGCTGC TGGCAATTGT TGACCAAGCC ACCAACCCGT GGGGTGTAAA AGTCACGCGA ATTGAAATAA AAGATGTCCA GCCACCATCC GATCTAACGG CGGCGATGAA TGCTCAAATG AAAGCCGAGC GAAATAAACG AGCGGAGATT CTCGAAGCAG AAGGGGTACG CCAAGCTGAA ATTTTAAAGG CTGAAGGTCA TAAGCAATCG GAGATATTAA AAGCTGAGGG CGAAAAGCAG TCTGCTATTC TCCATGCTGA AGCTCGAGAA CGCGCCGCGC AGGCAGAAGC AAAAGCGACT TATATGGTTT CTGAAGCGAT TGCCAAAGGC GATATGCAAG CCGTCAATTA CTTCATTGCT CAGGGCTATA CCGAAGCGAT CAAAAGCATT GGTCAAGCCG AAAACGGCAA AATCATTATG CTTCCATTAG AAGCGACCGG ACTAATGGGC TCGGTTGCAG GGATAGCAGA GATGTTTAAA CAACAAGATA AAGAATAA
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Protein sequence | MPIDSLITIG IFVVLAVVIL SSAIKTVPQG NNWTVERFGR YTHTLKPGLN LIIPFVDKIG QKVNMMERVL DIPAQEVISK DNANVVIDAV GFVQVIDAAK AAYEVNDLEH AIRNLTLTNI RTVLGSMELD EMLSQRDMIN SKLLAIVDQA TNPWGVKVTR IEIKDVQPPS DLTAAMNAQM KAERNKRAEI LEAEGVRQAE ILKAEGHKQS EILKAEGEKQ SAILHAEARE RAAQAEAKAT YMVSEAIAKG DMQAVNYFIA QGYTEAIKSI GQAENGKIIM LPLEATGLMG SVAGIAEMFK QQDKE
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