Gene VEA_004135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004135 
Symbol 
ID8557875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2804861 
End bp2805823 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content45% 
IMG OID646407237 
Productferrochelatase protoheme ferro-lyase 
Protein accessionYP_003286760 
Protein GI262394906 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA ATAATAAACA GGGTGTACTC CTCGTGAACC TGGGTACTCC TGACGCACCA 
ACCGCTCCTG CCGTAAAGCG CTTTTTAAGT CAGTTTCTTC ATGATCACCG AGTGGTAGAC
ATGACTCGAT GGCTTTGGTG TCCGCTATTG CACGGCGTTA TCCTTCCAAT CCGAGCTCCC
AAGGTTGCTA AACTCTACCA ATCAGTTTGG ATGGAAGAGG GCTCGCCACT GATGGTGTAC
TCTAAGCGTC AAACAGAAAA GCTGGCTCAA AAGCTTGATA TGCCAGTCGA ACTTGGCATG
ACTTATGGAA ATCCAAGTTT GCAATCAGGT TTTGAAGCGC TATTGGCCCA AGGGGTAGAG
GAAGTCATCG TTTTACCTTT GTATCCGCAA TACTCGGGCA CAACAACGGC AGCGGTTTCT
GACGGAATCA CTAAAGCGTT TAAAAACCTG CCCGTGATGC CGGGCTTTAG CTTTATTCGG
GATTACTACA ATCACCCGAA ATACATCGAA GCGTTAGCGC ATTCAGTTCG TGAACATTGG
CAAGAGTATG GTAAGGGAGA CTACTTGCTA TGTTCTTATC ACGGTATTCC AAAACGTTAC
GCTGATAATG GGGATGTTTA CCCTCAGCAC TGTGAAGAGA CGACTCGCTT ACTCGCTGAA
GCGTTAGGGT TAAACGAGCA ACAGATAGGT ATGACGTATC AGTCTCGATT TGGCCGAGAA
GAGTGGTTAC AGCCCTATAC CGATAAAACC CTAGAGGCAC TTCCTGCAAA AGGGGTAAAA
AATATCAATG TAGTGACACC AGCATTCTCT TCGGATTGTT TAGAAACGTT GGAAGAGATC
TCGGAAGAGT GTAAAGAGAT TTTCCTTGAA GCAGGTGGTG AAAGCTTTAC TTACATTCCT
TGTTTGAACG ATAGTGAGCT TCATATAGAA ATGATGGCTG AGTTAGTTCA CTCTAAGCTT
TAG
 
Protein sequence
MKENNKQGVL LVNLGTPDAP TAPAVKRFLS QFLHDHRVVD MTRWLWCPLL HGVILPIRAP 
KVAKLYQSVW MEEGSPLMVY SKRQTEKLAQ KLDMPVELGM TYGNPSLQSG FEALLAQGVE
EVIVLPLYPQ YSGTTTAAVS DGITKAFKNL PVMPGFSFIR DYYNHPKYIE ALAHSVREHW
QEYGKGDYLL CSYHGIPKRY ADNGDVYPQH CEETTRLLAE ALGLNEQQIG MTYQSRFGRE
EWLQPYTDKT LEALPAKGVK NINVVTPAFS SDCLETLEEI SEECKEIFLE AGGESFTYIP
CLNDSELHIE MMAELVHSKL