Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004134 |
Symbol | |
ID | 8557874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2803425 |
End bp | 2804813 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407236 |
Product | di-/tripeptide transporter |
Protein accession | YP_003286759 |
Protein GI | 262394905 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACC AACATCAATA TTTCGGCCAC CCTCGTGGCT TGTTCTTATT GTTCGGTACT GAACTGTGGG AACGCTTTTC TTACTACGCA ATGCGCGCCA TTCTAGTACT TTACCTTACA GATACAACGA TGAATGGCGG CCTTGGCTGG TCAACCAAAG ACGCACTAGA CCTATACGGT ATTTATACTG GTCTTGTGTA TATCACACCT CTCATCGGAG GTTACTTAGC GGATAACTAT CTAGGTCAAC GCCGTTCAAT TTTGCTTGGT GGCGCGTTAA TGGCTATCGG CCAGTTTACA CTCGCACTTC CTGCTGACGC TCTGGGTATT GGTTCGCTAC ACAGTTTCTA TTTAGGTCTT GGTCTGCTTA TCACTGGTAA CGGCCTCTTT AAGCCGAATA TCTCAACCAT GGTTGGCGAT TTATATAAAG AAGGTGACAA CCGTCGTGAC GGCGCATTCA CTATCTTTTA TATGGGTATC AACTTAGGTG CGTTACTTGC CGGCGTCGTT TCTGGCTCTG TGACAACCTC TTACGGTTGG AAAGCCGGTT TTGTGGCCGC AGGTGTAGGT ATGATTATTA GCTTAGTGAT GCAAATGGTG CTAGCTCAGT CTTGGCTTGG TGACATCGGT CGCGAGCCCG CAGCAAAACG AGATCTAAGC AACAAAAACT CCACCACGAA GCAACCCCTA ACGAAAGAAG AAGTAAACCG ACTAAAAGTA ATTTTGGTCA TGAGCTTATT CACTATCGTC TTCTGGGCTG GCTTTGAGCA GGCCGGTGGC CTAATGAACA TCTACACTCA ACAATATACT GATCGTATGA TTGGTGGTTT TGAAGTACCT GCTGCGTGGT TCCAATCGCT AAACCCATTT TTCATTATTA CCCTAGCACC AGTTCTGGCG GTCCTTTGGG TAAAACTGGG GAAACGCGAA CCTACGTCGC CAGTGAAATT TGCGATGGCA CTATTTTTCT TGGCAATTGG CTTCCTATGT ATGGTTGGCG CTGTGCTAGA ACAAGGTGGA GACACAACGG TAAAAACATC AATGTTGTGG CTGGTGGGTG CTTTCTTCTT CCACACCTTG GGCGAACTGT GCTTATCTCC AATTGGTCTT TCACTAGTGA CCAAGTTAGC ACCGCTTCGC TTAGCTTCAC TCATGATGGG TGCATGGTTT GGCTGTAATG CGATTGCAAA CTACGTTGCG GGCTATGTGG GATCTCACGT AGGAGAATTG GGCGCAATGG CTATCTTTAG TGGCATTGCA GTCAGCGCTA CCGTGAGTGG CGTCATCCTA CTTCTGTTCT CGAATACGCT CGTTCGCTGG ATGCATGGTG CAGAGAATAC TCACAGCACA GCAGAACAAG TAGAAGAGCA GCAAGTACAA GTCGCTTGA
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Protein sequence | MSNQHQYFGH PRGLFLLFGT ELWERFSYYA MRAILVLYLT DTTMNGGLGW STKDALDLYG IYTGLVYITP LIGGYLADNY LGQRRSILLG GALMAIGQFT LALPADALGI GSLHSFYLGL GLLITGNGLF KPNISTMVGD LYKEGDNRRD GAFTIFYMGI NLGALLAGVV SGSVTTSYGW KAGFVAAGVG MIISLVMQMV LAQSWLGDIG REPAAKRDLS NKNSTTKQPL TKEEVNRLKV ILVMSLFTIV FWAGFEQAGG LMNIYTQQYT DRMIGGFEVP AAWFQSLNPF FIITLAPVLA VLWVKLGKRE PTSPVKFAMA LFFLAIGFLC MVGAVLEQGG DTTVKTSMLW LVGAFFFHTL GELCLSPIGL SLVTKLAPLR LASLMMGAWF GCNAIANYVA GYVGSHVGEL GAMAIFSGIA VSATVSGVIL LLFSNTLVRW MHGAENTHST AEQVEEQQVQ VA
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