Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004130 |
Symbol | |
ID | 8557870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2797663 |
End bp | 2798877 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646407232 |
Product | N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family |
Protein accession | YP_003286755 |
Protein GI | 262394901 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGCG GACAGATTGG TAATGTAGAT TTAGTAAAAC AGCTTAACAG CGCTGCGGTA TATAGGCTGA TTGATCAGCA AGGTCCTATC TCCCGTATTC AAGTCGCAGA TGTGAGCCAG CTCGCACCTG CTAGTGTTAC CAAAATAACC CGCCAACTTT TAGAGCGCGG CCTTATTAAA GAGGTCGCCC AGCAAGCTTC AACTGGTGGT CGTCGTGCAA TCTCTCTGAC CACCGAAGTC AAACCCTTCC ACTCTATTGC GGTTCGTTTA GGTCGAGATT ACGTACAATT TTGTTTGTAC GATTTAGGTG GCACTGCACT TGCGGAAGAT CAACACGAAC TGCATTACAC CAACCAAGCT GACTTGATCG CTGGGCTTAT CGATTTACTT AAAGACTTCG TAAACCGTTG CGAAGACAAA ATTGATCAGC TCATCGCAAT TGGTATTACG CTACCGGGCC TTGTAAACCC AACAACAGGC GTAGTTGAGT ACATGCCGAA TACCGATATC GATAATCTGG CGCTGGGTGA AATTGTTGGA GAGAAGTTTA ATACCGCATG CTTTGTTGGG AATGACGTAC GTGGCATGGC GTTAGCGGAG CACTACTTTG GGGCAAGCCA AGACTGTCAG GACTCCATTT TAGTTAGCGT TCACCGCGGT ACTGGCGCAG GTATTATCGT TAACGGCCAG GTTTTTCTTG GCTTTAACCG CAACGTCGGT GAAATTGGTC ATATTCAAAT CGATCCGCTT GGTGAACAGT GCCAATGTGG GAACTTTGGT TGCTTAGAAA CCGTAGCAGC AAACCCAGCC ATTATCCAAC GAGTAAAACA ACTGATTGCT CAAGGCTATG AGTCAAGCTT GACTGACCTT GAAAACATCA CGATTGAAGC AGTGTGTCAG CATGCAATGG ATGGTGACGA ACTTGCAAAG CAGAGTTTAG TGCGAGTGGG TAACCAGTTA GGTAAAGCGA TTGCAATTAC CGTTAACTTG TTTAACCCTC AGAAAATTGT CATTGCGGGC GACATTACTG CTGCACAAGA CATAGTCTTC CCTGCAATTC AACGTAATGT CGAAAATCAA TCTCTCAAAA CTTTCCATAA CGACCTTCCT ATCGTGGCTT CACACATTGA TAAGCAGCCA ACGATGGGCG CATTTGCGAT GATTAAACGC GCAATGCTAA ACGGAGTTTT GTTACAAAAG TTACTTGAAG ACTAA
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Protein sequence | MNGGQIGNVD LVKQLNSAAV YRLIDQQGPI SRIQVADVSQ LAPASVTKIT RQLLERGLIK EVAQQASTGG RRAISLTTEV KPFHSIAVRL GRDYVQFCLY DLGGTALAED QHELHYTNQA DLIAGLIDLL KDFVNRCEDK IDQLIAIGIT LPGLVNPTTG VVEYMPNTDI DNLALGEIVG EKFNTACFVG NDVRGMALAE HYFGASQDCQ DSILVSVHRG TGAGIIVNGQ VFLGFNRNVG EIGHIQIDPL GEQCQCGNFG CLETVAANPA IIQRVKQLIA QGYESSLTDL ENITIEAVCQ HAMDGDELAK QSLVRVGNQL GKAIAITVNL FNPQKIVIAG DITAAQDIVF PAIQRNVENQ SLKTFHNDLP IVASHIDKQP TMGAFAMIKR AMLNGVLLQK LLED
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