| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004114 |
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| Symbol | |
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| ID | 8557854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2780903 |
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| End bp | 2782669 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407216 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003286739 |
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| Protein GI | 262394885 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTATTC CAGTTCGTGA GTTTGACGCC GTAGTAATCG GCGCTGGTGG TGCAGGTATG
CGCGCTGCAC TACAAATTTC AGAACAAGGC CTATCATGTG CTTTGTTGTC AAAAGTATTT
CCAACACGTT CTCATACTGT GTCTGCACAG GGCGGTATTA CCGTTGCTCT GGGTAACTCG
CACAAAGACG ATTGGCAATG GCACATGTAT GATACCGTTA AAGGTTCCGA TTACATCGGT
GACCAGAACG CGATTGAATA CATGTGTAAA AATGGCCCTG AGTCCGTTAT CGAACTAGAA
AAAATGGGTC TTCCATTCTC TCGTTTTGAT AACGGTACTA TCTACCAACG TCCATTCGGT
GGTCAGTCAA AAGAATTTGG TGGTGAGCAA GCTGCACGTA CAGCAGCAGC TGCGGACCGT
ACAGGTCACG CGCTTCTGCA TACGCTTTAC CAACAAAATG TGAAACACAA AACCACCATT
TTCTCGGAAT GGTATGCACT AGACTTGGTG AAAAACCAAG ACGGCGCCGT AATGGGCTGT
ACTGCGATTT GTATGGAAAC AGGCGAGATT TGTTACTTCA AATCGAAAGC AACGATTCTA
GCAACAGGTG GTGCAGGTCG TATTTACGCG TCGACCACTA ACGCACACAT CAACACTGGT
GACGGTGTAG GTATGGCATT GCGTGCGGGT GTACCTATGC AAGACATGGA AATGTGGCAG
TTCCACCCAA CGGGTATCGC TGGTGCAGGT GTTCTTGTAA CAGAAGGTTG TCGTGGTGAA
GGTGGTTACC TTCTAAATAA AGATGGCGAA CGCTTCATGG AGCGCTATGC TCCTAACGCG
AAAGACCTTG CAGGTCGTGA CGTAGTTGCA CGTTCAATGA TGATCGAAAT TCGTGAAGGC
CGTGGTTGTG ATGGTCCTTG GGGTCCACAC ATTAAGCTGA AGTTGGATCA CCTTGGTAAA
GAAGTGCTTG AGTCACGTCT GCCTGGTATC TGTGAGCTGT CTCGTACTTT CGCGCACGTT
GATCCAGTGA AAGAGCCAAT TCCAGTAATT CCAACCTGTC ACTACATGAT GGGTGGTGTA
CCGACTCAAG TGTCTGGCCA AGCAATCAAG CAAAAGGCTG ACGGCAGCGA GATGGAAGTA
CAAGGTCTAT ATGCATGTGG TGAGATTGCT TCTGTATCAG TACACGGAGC AAACCGTCTA
GGCGGCAACT CATTACTAGA CTTGGTCGTG TTTGGTCGCG CGACTGGCTT GCACCTTGGC
GAAACGCTCG CAGCGCAAGC TGAGGCACGC CCTGCAACTG AATCTGATAT TGAAGCATCT
CTAGCGCGTA CCATGCGTTG GGAAAATAGT ACTGGCGGTG AAGATCCAGT TCAAATCCGT
AAAGACCTAC AAGCTTGCAT GCAAAACAGC TTCTCGGTAT TCCGTGAAGG CGATGCAATG
GCAACGGGTC TAGAAGAGTT GAAAGTGATT CGCGAACGTC TGAAAGATGC ACATCTAGCG
GACAAGTCTT CTGAATTCAA CACGCAACGT ATTGAGTGTC TAGAGCTAGA CAACTTGATG
GAAACAGCAT TCTCTACAGC CGTAGCGGCT AACTACCGTA CTGAAAGCCG TGGCGCACAT
GCTCGTTTCG ATTTCCCTGA GCGTGATGAT GAGAACTGGC TATGCCACTC TATCTACAAC
CCGGAAACAG AAGCGATGAC TAAGCGTGAT GTGAACATGA CGCCAACGCA TCGTGAAGCT
TTCCCGCCGA AAGTACGTAC ATACTAA
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| Protein sequence | MSIPVREFDA VVIGAGGAGM RAALQISEQG LSCALLSKVF PTRSHTVSAQ GGITVALGNS
HKDDWQWHMY DTVKGSDYIG DQNAIEYMCK NGPESVIELE KMGLPFSRFD NGTIYQRPFG
GQSKEFGGEQ AARTAAAADR TGHALLHTLY QQNVKHKTTI FSEWYALDLV KNQDGAVMGC
TAICMETGEI CYFKSKATIL ATGGAGRIYA STTNAHINTG DGVGMALRAG VPMQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKDGE RFMERYAPNA KDLAGRDVVA RSMMIEIREG
RGCDGPWGPH IKLKLDHLGK EVLESRLPGI CELSRTFAHV DPVKEPIPVI PTCHYMMGGV
PTQVSGQAIK QKADGSEMEV QGLYACGEIA SVSVHGANRL GGNSLLDLVV FGRATGLHLG
ETLAAQAEAR PATESDIEAS LARTMRWENS TGGEDPVQIR KDLQACMQNS FSVFREGDAM
ATGLEELKVI RERLKDAHLA DKSSEFNTQR IECLELDNLM ETAFSTAVAA NYRTESRGAH
ARFDFPERDD ENWLCHSIYN PETEAMTKRD VNMTPTHREA FPPKVRTY
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