Gene VEA_004101 details

Gene Information

• Locus tag: VEA_004101
• ID: 8557841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2763430
• End bp: 2763858
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646407203
• Product: histidine triad family protein
• Protein accession: YP_003286726
• Protein GI: 262394872
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000876238
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTTG AACTTCATCC TCAATTGGCA AAAGACACTT CGGTGATTGG TCACTTCCCA 
CTTTGCGTCG CGCTTCTTCA TAAAGATAAT GCTGTGCCAT GGGTTATCTT GGTGCCTAAA 
CGCGAAAATT TGAAAGAGCT ACACCACTTG CCAATGCAAG AGCAACAACA GTTTTTGCTC 
GAATCTCAAG CGGTAAGCCA AGCACTCGAA GCGACATTCC GCCCAGACAA GTTAAACCTT 
GGCGCCCTAG GTAACATGGT GCCACAGCTG CACATTCACC ATATTGCGCG CTTTAAAGAC 
GATATGGCAT GGCCAGGACC AGTTTGGGGG AATACAAAAG GAGAGTTTCG TACTGACGAA 
GAACAAGAAG AGATTCTTAA CCGAATTCGT AATGTGTTGT CGTTAAGCTC TATCTTCCGT 
AAAGCGTAA 

 

Protein sequence

MSFELHPQLA KDTSVIGHFP LCVALLHKDN AVPWVILVPK RENLKELHHL PMQEQQQFLL 
ESQAVSQALE ATFRPDKLNL GALGNMVPQL HIHHIARFKD DMAWPGPVWG NTKGEFRTDE 
EQEEILNRIR NVLSLSSIFR KA