Gene VEA_004095 details

Gene Information

• Locus tag: VEA_004095
• ID: 8557835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: -
• Start bp: 2755495
• End bp: 2757435
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 646407197
• Product: DinG family ATP-dependent helicase YoaA
• Protein accession: YP_003286720
• Protein GI: 262394866
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCAA AAACTTTTTC CTCTGATGGC GCGTTAGGTA AGGCCATTCC GGGCTTTCAA 
GCTCGTCAGC CACAAATCGA TATGGCGGAA GCCGTCAGCA GTGCGATCAA AGATCAAACC 
CAGTTGGTGG TAGAGGCTGG AACCGGAACC GGTAAGACCT TCGCCTACCT AGTCCCAGCG 
CTGTTGAGCG GTAAAAAAGT GATCATCAGT ACAGGCTCGA AAAACTTGCA AGAGCAGTTG 
TACCATCGTG ACTTACCGCT CATGGTCAAT GCGCTTGGTT TTTATGGTCA AGTGGCGTTA 
TTAAAAGGGC GTTCTAACTA TCTGTGTTTG GATCGTTTGA GCCGCCAAAT GGTCGAAAGC 
CACACTAATG AATCTGACCC GACGTTATTA ACTCAACTGG TTAAAGTGCG TGCTTGGTCA 
TCAGAAACCA AAACAGGTGA CCTTGGTGAT TGTGATGATC TGCCAGAAGA CAGCATGATC 
ATTCCGACCA TCACTTCAAC CAATGATAAC TGTTTAGGTA AAGAGTGTCC GAGCTACACC 
GATTGCTTTG TATTGAAAGC GCGTAAGCGA GCCATGGATT CCGACATTGT TGTGGTGAAC 
CATCACTTAT TTCTTGCTGA CTTAGCGATC AAAGAAACAG GATTTGGTGA ACTGATCCCA 
GAAGCCGATG TGTTTATTTT TGATGAAGCT CATCAGTTGC CAGATATTGC GAGCGAATAT 
TTCGGCCAGT CAGTTTCAAG CCGTCAAATT CATGATCTTG CCAAAGACAT TGAAATAGCC 
TACCGCACCG AAGCCAAAGA TATGCGTCAA TTGCAAAAAG TGGGCGACAA ACTCATGCAA 
AGCGCAATGG ACATGCGGAT TGTACTGGGT GAGCCAGGCT TTCGTGGCAA CTGGCGTGAG 
GCGTTGCAAT CAGGGTCTAT TAAGCGAGAA TTATTGCGCT TAACTGATAG CCTCGAATTG 
GCGATTGATG TACTCAAAAT AGCCTTAGGG CGCAGTCAAT TACTGGATAC CGCCTTTGAA 
CGTGCCAATT TGATCAAAGG CCGCATCGAC CGGGTATGCG ATGTCGATAT TACCGGTTAC 
TCATACTGGT ACGATACCTC GCCTCGTCAT TTCGCTCTGC ACATTACGCC TCTTTCTGTC 
GCGGACAAGT TCCATGAGCA AATAGAGATT AAACAAGGCG CGTGGATTTT CACGTCAGCA 
ACTCTAGCCG TATCGGGCGA CTTCAAGCAC TTTACTGAGC GCCTTGGCCT CAAGCCTACA 
AAGCAATTTT CTCTGCCGTC CCCCTTTGAT TATCAAAAAC AAGCGCGCCT TTGTGTGCCA 
AGGTATCTGC CAGAGCCAAA CAGTAACGGC TTAGCGGATA AGTTAGTCCG AATGCTTGCT 
CCGGTGATTG AAGAAAATGA TGGTCGCTGC TTCTTTTTAT GTACCTCGCA CAGCATGATG 
CGTGAACTAG GTGAGAAGTT CCGAGAAGTA CTTGATCTGC CTGTGTTAAT GCAAGGGGAG 
ATGAGTAAGC AGAAAACCTT GGCGGAGTTT ATGGAACTGG GTAACGCTTT ACTCGTGGCG 
ACAGGCGCTT TCTGGGAAGG GATTGATGTT AGAGGTGATG CGCTGAGCTG TGTTATTATC 
GACAAATTAC CGTTTACCGC CCCTGACGAT CCGTTACTCA AAGCCCGTAT CGAGGATTGT 
CGATTACGTG GTGGTGAACC ATTTGCTGAA GTACAAATCC CGGATGCAGT GATTACGTTA 
AAGCAGGGTG TAGGGCGATT AATTCGAGAT CAGAAGGATC ACGGTGCGTT GATCATTTGT 
GATAATCGCC TTGTCACGCG AGACTACGGT GGTATTTTCC TCGGAAGCCT ACCACCTATC 
CCAAGAACGC GAGACTTAGA TGGAATCAAA GCATTCCTGA AAGCAGAACA ATCTGTCACA 
GACGCAAGTG CTGAGGCATA A 

 

Protein sequence

MIAKTFSSDG ALGKAIPGFQ ARQPQIDMAE AVSSAIKDQT QLVVEAGTGT GKTFAYLVPA 
LLSGKKVIIS TGSKNLQEQL YHRDLPLMVN ALGFYGQVAL LKGRSNYLCL DRLSRQMVES 
HTNESDPTLL TQLVKVRAWS SETKTGDLGD CDDLPEDSMI IPTITSTNDN CLGKECPSYT 
DCFVLKARKR AMDSDIVVVN HHLFLADLAI KETGFGELIP EADVFIFDEA HQLPDIASEY 
FGQSVSSRQI HDLAKDIEIA YRTEAKDMRQ LQKVGDKLMQ SAMDMRIVLG EPGFRGNWRE 
ALQSGSIKRE LLRLTDSLEL AIDVLKIALG RSQLLDTAFE RANLIKGRID RVCDVDITGY 
SYWYDTSPRH FALHITPLSV ADKFHEQIEI KQGAWIFTSA TLAVSGDFKH FTERLGLKPT 
KQFSLPSPFD YQKQARLCVP RYLPEPNSNG LADKLVRMLA PVIEENDGRC FFLCTSHSMM 
RELGEKFREV LDLPVLMQGE MSKQKTLAEF MELGNALLVA TGAFWEGIDV RGDALSCVII 
DKLPFTAPDD PLLKARIEDC RLRGGEPFAE VQIPDAVITL KQGVGRLIRD QKDHGALIIC 
DNRLVTRDYG GIFLGSLPPI PRTRDLDGIK AFLKAEQSVT DASAEA