Gene VEA_004076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004076 
Symbol 
ID8557815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2738544 
End bp2739008 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content46% 
IMG OID646407177 
Product3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase inferred for ABFAE pathway 
Protein accessionYP_003286701 
Protein GI262394847 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC TTCCTCCCAT CGAACAACTT TTGCCACACG ACAAACCAAT GATCTTGGTC 
GATCGTGCCT TGGATGTTCA ACAAGATACG ATTCACTGCC AGGTTGATAT CGCAGAACAC
AACCCGTTCT TCGACTTGGC CTCTCAAACC GTGCCAGCTT ACGTTGGCAT TGAGTTTATG
GCGCAATCTG TCGCGGCGTG GTCTGGTTAC CACGCATTAA TGAAAGAACA AGCGCCACCG
ATTGGCTTTT TACTTGGTAG CCGTCGATAC ACGTCTGAAT GCGATGCGTT TTCTCGCGGA
CAGGTGCTCG ATGTGTATGC TGAAAAAGTT ATGGAAGATA ACGGTATGGC GGTTTTTTCA
GCCCATATTG AGCTACAAGG AACTGTTGTA GCGACTTGCC AATTGAACGT TTACGTTCCA
TCAGAAGAAA AATTACAAGA AATGAAAATC AGGAGTCAAC AATGA
 
Protein sequence
MTKLPPIEQL LPHDKPMILV DRALDVQQDT IHCQVDIAEH NPFFDLASQT VPAYVGIEFM 
AQSVAAWSGY HALMKEQAPP IGFLLGSRRY TSECDAFSRG QVLDVYAEKV MEDNGMAVFS
AHIELQGTVV ATCQLNVYVP SEEKLQEMKI RSQQ