| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004069 |
|---|
| Symbol | |
|---|
| ID | 8557808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2730112 |
|---|
| End bp | 2731818 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646407170 |
|---|
| Product | acyltransferase |
|---|
| Protein accession | YP_003286694 |
|---|
| Protein GI | 262394840 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4261] Predicted acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGATT ATCGCCCCTG CTTTTTGATT CCTTGCTACA ACCACGGCAG CACAATTGCA
GACGTGGTTG CGTCGTTATC CTCTTTCGCT TTGCCAGTGC TGGTCGTGGA CGACGGCAGT
AATGAAGACA CCAAACAAGC GCTTTCTGCT TTGAGTGAAC AAGGGCTGAT AAAACTGATT
AGTTTGAGTG AAAACCAAGG CAAAGGTGGC GCGGTGATGG CAGGCCTACA TCAAGCTCAC
CAGCTTGGTT TTACGCACGC CATTCAAATC GACGCAGACG GTCAACACGA CCTAGAAGCA
TTGCCGAAAT TGCTCAGCGC CAGCGAAACA AAACCAGATA ACCTGATTTC GGGCCAACCG
ATATACGACG AGAGCGTACC CAAATCCCGT TTGTATGGTC GCTACGCTAC ACACGTTTGG
GTGTGGATAG AAACCTTGTC ACTGTCTATC AAAGACAGCA TGTGCGGTTT TCGCGCCTAC
CCAGTGGCGA AAACGGTCGC CGTGTTGAAC AAGTACAGCA TCGGCAAACG CATGGATTTT
GATATCGAAA TTCTAGTGCG AATGTATTGG GAAGGCGTCG ACATTGATTT TGTTCCAACG
CGCGTGATCT ACCCTGAAGG TGGCATTTCC CACTTCGACG CATTGTGGGA CAACGTCAAG
ATAAGCTGGA TGCACACTCG CCTATTTTTT GGCATGTTGC CGCGCATTCC TTCGCTACTC
GCCAGAAAGC GCCGTCATAC AGACGACAGC AATGCCCACT GGTCGAAACG AAAAGAACAA
GGCACGATTT TAGGCATCAA AACCTTACTC GCGGTTTACC GCTTGTTCGG CAGAAAAGCG
TTCGACCTGA TTTTGAAGTT AGTCATGCGC TACTACCACT TCACGGGTAA ATCTGCCCGC
GAAGCGTCTG AGATTTACCT GCAAAACTTG CAGTACTACG CAGCGCAGCA GAACATCGCA
CTACCAAAAC AGTTGGACAG CTATCATCAT CTGCTTTCTT TTGGGCGTAC CATGCTCGAC
AAACTGGCAG CATGGCAAGG TGACTTTAAC GTCGATAACC TAACCATTCA CGGCCAGCAT
CATTTCGAAG AGATGGCGCA GAAAAAACAA GGCGTGCTCA TTTTAGGCTC GCACCTTGGC
AATATCGAAC TCTGCCGCGC GCTTGGTCGT CGACACTCTC ATGTCAAAAT CAATGCCTTG
GTATTTACCC AACACGCTGA ACAATTTAAT GCGGTAATGA AGGCGGTAAA CCCAAACTCG
GAACTGAATC TGATTCAAGT CAGCTCAATG GGACCAGACA CCGCGATTCT GCTTCAACAA
AAAATCGAGC AAGGCGAATG GGTAGTGATC GTTGGCGATC GCACTTCCAC CAGCAAAGAA
AATCGTGTCG TTTGGGCCGA TTTTCTTGGT AAACCTGCAC CATTCCCGCA AGGCCCATTC
ATGCTGGCCT CGGTATTAAA AGCGCCGGTT TACCTACTCT TCGGCCTACG CGACGACGAA
GCAAACACTC CGCATTTTAA TGTGTACTTT GAACACTTTA GTGACCAAAT CACGCTACCG
CGCAAAGAGC GTCAGCAGGC ACTAGAACAC GTTGTTCAAC AGTACGCACA CAGATTAGAA
CACCACACAC TGCAAGCGCC GTTACAGTGG TACAACTTTT TTAACTTCTG GACTTTAAGT
AATCAGCCAC ATGACAAACA ACAATAA
|
|---|
| Protein sequence | MSDYRPCFLI PCYNHGSTIA DVVASLSSFA LPVLVVDDGS NEDTKQALSA LSEQGLIKLI
SLSENQGKGG AVMAGLHQAH QLGFTHAIQI DADGQHDLEA LPKLLSASET KPDNLISGQP
IYDESVPKSR LYGRYATHVW VWIETLSLSI KDSMCGFRAY PVAKTVAVLN KYSIGKRMDF
DIEILVRMYW EGVDIDFVPT RVIYPEGGIS HFDALWDNVK ISWMHTRLFF GMLPRIPSLL
ARKRRHTDDS NAHWSKRKEQ GTILGIKTLL AVYRLFGRKA FDLILKLVMR YYHFTGKSAR
EASEIYLQNL QYYAAQQNIA LPKQLDSYHH LLSFGRTMLD KLAAWQGDFN VDNLTIHGQH
HFEEMAQKKQ GVLILGSHLG NIELCRALGR RHSHVKINAL VFTQHAEQFN AVMKAVNPNS
ELNLIQVSSM GPDTAILLQQ KIEQGEWVVI VGDRTSTSKE NRVVWADFLG KPAPFPQGPF
MLASVLKAPV YLLFGLRDDE ANTPHFNVYF EHFSDQITLP RKERQQALEH VVQQYAHRLE
HHTLQAPLQW YNFFNFWTLS NQPHDKQQ
|
|---|
| |