| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004056 |
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| Symbol | |
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| ID | 8557795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2719253 |
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| End bp | 2720461 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646407157 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_003286681 |
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| Protein GI | 262394827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.668799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATTT CTAAGCTTGG TTTAAGCGCA TCGATTACTG ATGCAGTAAA AGCGCTAGGT
TATGAAAAAC CGACCTCTAT CCAACAAAAA GCCATTCCAA TCGTACTGCG TGGTAGCAAC
TTAATTGCTG CAGCACAAAC GGGGACAGGT AAAACGGCCA GTTTTGTTCT ACCAATCTTA
GAAAAGCTTA GTCAAGGCGA AACTCAACGT AAAAAACGTG CTCGCGCTAT TATTCTTACG
CCCACACGCG AACTTGCGCT TCAGGTTCAT CAAAGCATTG AAGCTTATGG TAAAAACTTA
CCGCTGCGCT CAATGGCGAT GTTTGGTGGT GTGGATTATG CGCCACAAAA ACAAGCCTTG
ATCGAGGGTG TCGATATTGT GGTAAGTACG CCGGGACGTT TGATTGACCT GTACGGTCAA
CGCGCTATTC ACTTTGATGA AGTGGAAATG CTAGTGCTTG ATGAAGCGGA CAAGATGTTG
GACATGGGAT TCATCGATGC GATCGATAAG ATCGTTGATT GCATGCCAGA ACATGTTCAA
AGTCTGCTGT TCTCGGCAAC GCTATCTAAC CCTGTTCGTG ATTTGGCGAA AAACGCGATT
ATTGATCCTG AAGAGATCAC GATTGCAAAA CACAGTGCAT CTAAGTCGAA CATCAAGCAG
TGGATCACCA CCGTCGATAA GGACATGAAG TCGTCGCTGT TAAGTCACAT GCTCAAAGAA
AACGACTGGT CGCAAGTACT GGTATTTATT GAAACCAAAC ACGGTGCTGC CAAGCTTGTT
AGCCAACTTG AAAAGCGTGG CATTGTGGCT GAAGCGTTTC ACAGTGGCCG TAATCAGCGT
GTTCGCCAGG AATTAATAGA AAAGTTCAAA GCCGGTGAAA TCCAGTACCT AGTTGCAACT
GGTGTTGCAG CGCGCGGTAT TGATATCGAT AACTTGCCCG TTGTTATTAA CTATGACTTG
CCGTATCCAG CAGATGAATA TGTACACCGT ATTGGTCGTA CCGGTCGTGC TGGCGCACAA
GGTGAAGCGA TCTCATTAGT CTCAAAAGAT GACTTTAAAA ACCTTTGTAT GATCGAGAGC
CGTTTAGGGC ACTTGCTAGA GCGAGTGGAA GTTGACGGCT TTGCACCAAG AAAGCCAGTG
CCGATTTCTA TTTTAAATTA CGTACCTAAG AACAAGCGTA AACCGCACGA TAAGCGCGAA
TCAAAATAG
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| Protein sequence | MPISKLGLSA SITDAVKALG YEKPTSIQQK AIPIVLRGSN LIAAAQTGTG KTASFVLPIL
EKLSQGETQR KKRARAIILT PTRELALQVH QSIEAYGKNL PLRSMAMFGG VDYAPQKQAL
IEGVDIVVST PGRLIDLYGQ RAIHFDEVEM LVLDEADKML DMGFIDAIDK IVDCMPEHVQ
SLLFSATLSN PVRDLAKNAI IDPEEITIAK HSASKSNIKQ WITTVDKDMK SSLLSHMLKE
NDWSQVLVFI ETKHGAAKLV SQLEKRGIVA EAFHSGRNQR VRQELIEKFK AGEIQYLVAT
GVAARGIDID NLPVVINYDL PYPADEYVHR IGRTGRAGAQ GEAISLVSKD DFKNLCMIES
RLGHLLERVE VDGFAPRKPV PISILNYVPK NKRKPHDKRE SK
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