Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004053 |
Symbol | |
ID | 8557792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2713632 |
End bp | 2716616 |
Gene Length | 2985 bp |
Protein Length | 994 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407154 |
Product | hypothetical protein |
Protein accession | YP_003286678 |
Protein GI | 262394824 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000445976 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGTTCA ACACACTCGC CTTGACTATG CTAACTGCGC TTCTTGCAGG TAAGAGCATG GCAACTACTC CGCCATCACC AGTTTGGCAT ACTATTGCGT TGAGCGATGG TACCTCTAGT GAGGCAATTT TACGCGGCAC TGCCGATTTC CACTGGTTTG AAGATAAACA AGGTAATGCC TTGGTTCATG AAGATGGCAT TTGGTTTTTT GCACAGATTC AGCGCGAGTC AGACATCCCA ACGTTACGCT CGACGGGTGT TGCTAAAACT CAATCGAGTG ATGCGCCTGA ATTGGCGAAG TTTCGCCCGG ATCTACAAGT TAAGCCGCAG TTATCTTCTC TAAAAACCAT TGAACCGATG GCGCGCCAAA ATCTATTGCG TTCGGCGCAA GGTTATCAGG CGATGAGTAG CTCATCGATG AAGCAACAAC CACTGTTGGT TGTGCAAGTC TCCTTTGATG ACCAAGCAAT GGTGCATGAC TTCGAACAAC GTGTGTTTAA TACCGATGGC CAAAGCGTTG TCGATTATTT TGATAAAAAC TCTCAAGGGA AATTCAAAGT TGTCCCTGCG ATTGAGAGTT ATGGTACCGC GAATGATGGT GTGATCAATG TGACCGTGGC GCAAAGCCAC CCAAATTGCC ACTCTAGCTC AACTGACAAG ACTTGCACTG CCAAGTTGAA TGCGGTCTTC ACCGAAGCAT ATCAAAAACT GGATCCGTAC TTTAATCTTT CGGCTTACGA CAGCAATCAA AATGGTACCG TAGAACCGTC AGAACTCTCA GTTATGTTTA TTTTTGCGGG TGGCGACCGT TCAACCGGAT TCCTTGATCG TCCTTCTATT TGGCCTCATA AATTCTCTCA CGACGATGTG ACACTAGATG GCAAAAAAAT TGCTGATTAC TGTGTGTTTG CTGACTACCA AGTTGATCAT CAAGCGACGT TAGGCGTGAT CGTACATGAG CTTGGCCACT TAATGCTTGG CTTGCCGGAT TTGTACGCAA GGAACAGTGA TGCTTCGATC GGTTCTTGGG GCGTGATGGG CGGTGGTTCA TGGGCACAGA AACCGGGAGA CTCATACGCA GGAGACACGC CAGTGAACAT GAGTGCGTGG AGCAAACACG CCGCTGGTTT CGTAGTACCA ACGATCACTC ATGAAAGCCC GATGCCTATT TCCGTGAACA ACGACGATGT CAAACTGGTG TATCTCGACC CGTACTTGAA AGAGTTTGGC CCACGCGTTT ATTTGGAAAA CCGTACCTTT AGCGGTTACG ACCGAGCATT GGCGGCAGAA GGCATACTAG CGACGTCGGT TAATGTCCAG AATCGCTTTA ACGATGTTGG CGCGATGCAG GTTCAAATCA TGCAGTCCGA TGGTCTGAAT GAGTTAGAAC ATGATGGAAG CAGTGATGCC GGCGATTTGT ATCCTAATGG TGGCAATGTC ATTTCAGATA CATCGACCCC AAGTCTGAGA GCGATCGCCG GGTTTGATAC TGGGGTTCGT ATTTCCAACA TTGCCAGCAA TACCAACGGC GGCAGTTTTT CTCTTGAGCA TATAAACGAG CCAAATAAAT CGGCATGGTT GAACTCTCTT CACCAAGGTT ATGTGTACGC AAGTGGCAGT AACACTCTGG CGGTATCATT GGATTTGAAT GCTGAGACAA AGCTTGATGG TCTTCAACTT TACGCGCAAA GCAATAGCGC TCAAAGTGAC ATGACTTATC GAGTATGGCG ATTCCCATTC TCAGGTAACG TGGGCTACCG ATTAATATTG GATCAGAACA ATGCTGAACT TTTACAGCAA GGTAGCTTCC AAAAGCCATC CCGAATTTTA TTCCCTCAAC CAAGCCAATT AAGTGCGGGT CAGCACCTGT TAGTAGTGGA ATTAGAAGGC GGTGAATTTG AATCGAACTT TGACTTTGGC CGCTTACTAA AAACTGAAAA ATCATCTCTG CCTGTAATGT GGACTGGTAA TTACAACGAG ATAGGTACGT TTGGTTTAGA GCAAGCCGGA TTCTCTTATG TTCCGTTCGC AGCACTCTTG AATGTGGAGG CGAACAACAT TGTTGAAGCG AAAGCTGATT CACTGCAAAC CGATAAGAAT ACGCCAATCG ATCTGAACCT GATGGACAAT GATTTCATGG CCATAGGATA TCAGTTCAAT GTGGACATTG TGCAGAAGCC TGAGCACGGC ACCATTTCTG GCAACCAATA CCAACCTGAA GCTAACTTCG TTGGTTTGGA CAGCTTCCAA TATCGTTTGC TGTCTACGGA CGGCGTGTAT TCGTCTTCGG TTGTGAGCGT GCAGGTCGAA GTACTTGGTA GTAATGAAGC ACCAAAAGCG CTCATCGATG TGGATAGCCA AAAGATTACT GCTGGACAGA AAGTAACATT GTCGGCGGCA AACAGCACAG ATGCGGATGG CGATGTGTTG AACTACCGAT GGGAGCAATT GGCTGGTACT TCAGTTTCTA TCGGAAATTC GACCAGTGCT ACGGCAAGCT TTACAGTGCC TCAAGGTATA AAAGCGGGTG AGGTTCTGAC ATTCCGTCTA ACTGTTACTG ATCCAAGTAA TGAAACCTCC AGTGCTACCG TCAATTTAAC CATGCAAAAC GCAGCGCCAG TCACGTTAGC AGATACGGCG ACCGTTGCCG TTGGTGAAAG CATTGTGATT GATGCTGCTG GCAATGATTC GGATGTGAAT GGCGATAAAC TGGTTGTAGA AAGCGTACAG AACCTAACGG GCGTGGGAAG TGCGAGTGTA GAGAATGGTA AAATTCGTTT TCAAGCTCCG GATAGTGCGG TTGATAACAT CAAGCTGCAA TACACGGTTT CAGATGGCAA CGGTGCTACC GCAATAGGTG AAGTGACCGT TACGGTTGTC GCTTCCTTGA AAACAACGAC ATTCAAGAAC TCTGAAGGTA GCGGCAGTGT TTCTTATTGG GCTCTGATGT TACTCGTTGC ATTGGGCTGG CGACGCCGCG TCTAA
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Protein sequence | MKFNTLALTM LTALLAGKSM ATTPPSPVWH TIALSDGTSS EAILRGTADF HWFEDKQGNA LVHEDGIWFF AQIQRESDIP TLRSTGVAKT QSSDAPELAK FRPDLQVKPQ LSSLKTIEPM ARQNLLRSAQ GYQAMSSSSM KQQPLLVVQV SFDDQAMVHD FEQRVFNTDG QSVVDYFDKN SQGKFKVVPA IESYGTANDG VINVTVAQSH PNCHSSSTDK TCTAKLNAVF TEAYQKLDPY FNLSAYDSNQ NGTVEPSELS VMFIFAGGDR STGFLDRPSI WPHKFSHDDV TLDGKKIADY CVFADYQVDH QATLGVIVHE LGHLMLGLPD LYARNSDASI GSWGVMGGGS WAQKPGDSYA GDTPVNMSAW SKHAAGFVVP TITHESPMPI SVNNDDVKLV YLDPYLKEFG PRVYLENRTF SGYDRALAAE GILATSVNVQ NRFNDVGAMQ VQIMQSDGLN ELEHDGSSDA GDLYPNGGNV ISDTSTPSLR AIAGFDTGVR ISNIASNTNG GSFSLEHINE PNKSAWLNSL HQGYVYASGS NTLAVSLDLN AETKLDGLQL YAQSNSAQSD MTYRVWRFPF SGNVGYRLIL DQNNAELLQQ GSFQKPSRIL FPQPSQLSAG QHLLVVELEG GEFESNFDFG RLLKTEKSSL PVMWTGNYNE IGTFGLEQAG FSYVPFAALL NVEANNIVEA KADSLQTDKN TPIDLNLMDN DFMAIGYQFN VDIVQKPEHG TISGNQYQPE ANFVGLDSFQ YRLLSTDGVY SSSVVSVQVE VLGSNEAPKA LIDVDSQKIT AGQKVTLSAA NSTDADGDVL NYRWEQLAGT SVSIGNSTSA TASFTVPQGI KAGEVLTFRL TVTDPSNETS SATVNLTMQN AAPVTLADTA TVAVGESIVI DAAGNDSDVN GDKLVVESVQ NLTGVGSASV ENGKIRFQAP DSAVDNIKLQ YTVSDGNGAT AIGEVTVTVV ASLKTTTFKN SEGSGSVSYW ALMLLVALGW RRRV
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