| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004051 |
|---|
| Symbol | |
|---|
| ID | 8557790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2710999 |
|---|
| End bp | 2712468 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646407152 |
|---|
| Product | UPF0061 domain-containing protein |
|---|
| Protein accession | YP_003286676 |
|---|
| Protein GI | 262394822 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.243743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTT GGCAACGGGT CAGTTTCACC CATCGCTTTA GTCAATTACC GTCAGCTTTC
TATACTTTGG TCGAGCCGCA ACCCTTGGAT AACACTCGTT GGGTCGCTTG GAATGGTGAG
TTTGCGCAGC AGTTTGGTTT ACCAGCAGAG CAAAGCGATG AGCTATTGGC GGTTTTTTCT
GGGCAAAGCG AATTCGAACC GTTTCGCCCT CTGGCGATGA AATACGCAGG ACATCAGTTT
GGCGTTTACA ACCCAGACTT GGGCGATGGA CGTGGATTGC TGTTGGCGGA AATTGAGCAT
CAAGATGGCA CTTGGTTTGA TATTCACCTT AAAGGCGCGG GGCTAACCCC CTACTCGCGA
ATGGGGGACG GCAGGGCGGT GTTGCGCTCA ACCATTCGTG AGTATTTATG TAGTGAAGCC
ATGGTGGGGC TTGGGATTCC GACGACTCGT GCTCTTGGCA TGATGGTCAG TGACACGCCG
GTTTATCGCG AGAAAACAGA ATTCGGCGCA ATGTTGATTC GTATGGCGGA GACCCACGTG
CGTTTTGGCC ATTTCGAGCA TTTTTTCTAT ACCAATCAAT TGGCAGAGCA AAAGTTGCTG
GCGGACAAAG TGATCGAGTG GCACTTTGCT GATTGTGCAT CGGCAGAGAA GCCATACGCT
GCAATGTTTG GTGAAATTGT TCAGAAAACA GCGGACATGA TTGCTTATTG GCAAGCGTAT
GGGTTTGCTC ATGGTGTGAT GAACACCGAC AATATGTCGA TCCTTGGTCA AACGTTTGAT
TACGGCCCGT TTGGTTTTCT TGATGATTAT GAGCCGGGAT ATATTTGTAA TCATTCCGAC
TACCAAGGCC GTTATGCATT TGACCAACAG CCAAGAATTG CGCTTTGGAA CCTCTCAGCA
CTCGCGCATG CGCTATCGCC ACTCGTTGAG CGAGAAGATT TAGAAGCGTC GTTGAGCCAA
TTTGAAGTCC GGTTGAGTCA GCAGTTCAGC CGCCTAATGC GTGAGAAGTT GGGTTTAAAA
ACCAAGATCG CGGAAGATGG ACGTTTATTT GAAGCAATGT TTGAGCTCCT TCACCAAAAT
AACACGGATT ACACTCGCTT CTTTAGAACG CTTTCAAATC TTGATACTGA TTCTTCTCAA
GCCGTAATCG ACTTGTTTCT CGACCGAGAA GCTGCGCGAG CTTGGCTTGA TCTGTACTTA
GCTCGATGTG AGCTAGAGGT TGATGAACTA GGGGAGCTGA TTTCAGCCGA ACAGCGTTGC
GAACAGATGC GTCAAGCCAA TCCCAAATAC ATCTTGCGTA ACTACTTGGC TCAGTTGGCC
ATTGATAAAG CGGAAGAAGG GGACTTTAGT GAATTACACC GATTGGCCGA ACTGTTAAAG
CGCCCATTTG ATGAGCAACC CGAGTTTGAT GATTACGCGA AATTGCCACC GGAATGGGGG
AAGAAAATGG AGATAAGCTG TTCTTCATAA
|
|---|
| Protein sequence | MSIWQRVSFT HRFSQLPSAF YTLVEPQPLD NTRWVAWNGE FAQQFGLPAE QSDELLAVFS
GQSEFEPFRP LAMKYAGHQF GVYNPDLGDG RGLLLAEIEH QDGTWFDIHL KGAGLTPYSR
MGDGRAVLRS TIREYLCSEA MVGLGIPTTR ALGMMVSDTP VYREKTEFGA MLIRMAETHV
RFGHFEHFFY TNQLAEQKLL ADKVIEWHFA DCASAEKPYA AMFGEIVQKT ADMIAYWQAY
GFAHGVMNTD NMSILGQTFD YGPFGFLDDY EPGYICNHSD YQGRYAFDQQ PRIALWNLSA
LAHALSPLVE REDLEASLSQ FEVRLSQQFS RLMREKLGLK TKIAEDGRLF EAMFELLHQN
NTDYTRFFRT LSNLDTDSSQ AVIDLFLDRE AARAWLDLYL ARCELEVDEL GELISAEQRC
EQMRQANPKY ILRNYLAQLA IDKAEEGDFS ELHRLAELLK RPFDEQPEFD DYAKLPPEWG
KKMEISCSS
|
|---|
| |