| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004050 |
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| Symbol | |
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| ID | 8557789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2709788 |
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| End bp | 2710786 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407151 |
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| Product | TRAP-type C4-dicarboxylate transport system component |
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| Protein accession | YP_003286675 |
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| Protein GI | 262394821 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAGC CTCTAACTCT ACTATCTGTC TCTGCGCTTG CTGTAACGAG CTTTAACGCT
GCCGCGAATT GTGACCCAGG TGAAACGGTC ATCAAGTTCA GCCATGTAAC GAACGCGGAC
AAACACCCAA AAGGTATTGC GGCTTCGTTA CTTGAAAAAC GCGTTAACGA AGAGATGAAC
GGTAAAGTCT GTATGCAGGT GTTTCCGAAC TCAACGCTTT ACGATGATGA TAAGGTGTTG
GAAGCACTAC TAAATGGTGA TGTTCAACTT GCTGCACCTT CTCTTTCTAA GTTTGAGAAA
TTCACCAAAA AGTACCGCCT TTTCGATCTG CCTTTCTTAT TCGACGATGT CGACGCTGTT
GACCGCTTCC AAAACTCTGA AGCCGGTGAA AAGCTGAAAA ACTCAATGAA ACGACGTGGC
CTACAAGGTA TTGCGTTTTG GCATAATGGC ATGAAGCAAA TGTCAGCCAA CAAGCCGCTC
ATTTCTCCAG CCGATGCTGA AGGGCTTAAG TTCCGTGTTC AAGCTTCTGA CGTTCTCGTT
GCTCAGTTTG AACAGCTAGG CGCAAACCCG CAAAAAATGT CATTCAAAGA AGTGTACGGT
GGCCTGCAAA CTAAGGTTAT TGATGGTCAA GAAAATACTT GGTCAAACAT CTACGGCAAA
AAGTTCTTCG AAGTTCAAGA TGGCATTACG GAAACGAACC ACGGGATTCT GGATTACCTA
GTAGTGACGT CAAACGACTT CTGGAAAAAC TTACCAGACG AGCAGCGCGA GCAGCTAAAC
ACAATCATCC AAGAGGTGAC AGCGCAGCGT AATGCTGAGT CGACCAAAGT GAACCTTGCG
AACAAAAACA ACATCATCGA AGCTGGTGGT GTGGTTCGCA CGTTAACGCC AGAACAGCGC
CAAGAATGGG TCACTGCACT TCAGCCAGTA TGGAAGAAGT TTGAAAAAGA CATTGGTTCT
GACCTAATCG AAGCCGCTTT GGCTTCTAAC CAAAAATAA
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| Protein sequence | MFKPLTLLSV SALAVTSFNA AANCDPGETV IKFSHVTNAD KHPKGIAASL LEKRVNEEMN
GKVCMQVFPN STLYDDDKVL EALLNGDVQL AAPSLSKFEK FTKKYRLFDL PFLFDDVDAV
DRFQNSEAGE KLKNSMKRRG LQGIAFWHNG MKQMSANKPL ISPADAEGLK FRVQASDVLV
AQFEQLGANP QKMSFKEVYG GLQTKVIDGQ ENTWSNIYGK KFFEVQDGIT ETNHGILDYL
VVTSNDFWKN LPDEQREQLN TIIQEVTAQR NAESTKVNLA NKNNIIEAGG VVRTLTPEQR
QEWVTALQPV WKKFEKDIGS DLIEAALASN QK
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