Gene VEA_004049 details

Gene Information

• Locus tag: VEA_004049
• ID: 8557788
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: -
• Start bp: 2709043
• End bp: 2709717
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 646407150
• Product: TRAP-type C4-dicarboxylate transport system small permease component
• Protein accession: YP_003286674
• Protein GI: 262394820
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGA CTTTTTTTGC CAAGGCTGGA CGAATCACCG ATGCCATTGA AGAGACTTTG 
ATTGCTTTCT TCCTAGGTGC CATGACCTTG TTAACCTTTG CCAATGTCAT CTTTCGTTAT 
GTCTTTAACG ACAATATTCT TTGGGCGCTT GAGCTCACCG TCTTTATGTT CGCATGGATG 
GTGTTGGTCG GCGCTTCTTA CGGTGTGAAA AAACACTTTC ATATTGGTGT TGATGTGATC 
ATCAACATAG TGCCAGAGGG CAAACGAAAA GCCTTGGCGT TATTTGCTGC AATATGCTGT 
TTAGCCTTCT CTATTTTGCT TTTAATTGGC TCTTGGAACT ACTGGTATCC GTTCGCCACA 
GACCGAGCGT GGTATGAAAC GGATGATATT CCAATGCCGG AAATGCTTCA GTTTATGGCG 
GATTGGTTAA ACGAGGGAGA GCGTTACGAA AAGCTGCCAC GTTTTATTCC TTATTTCGCT 
TTGCCGCTTG GTATGGCGTT GCTAACGCTG AGATTTGCTC AGGCAACATG GCAAATTGCT 
ACCGGAAAGC TCGACCGACT GATTGCAGGA CATGAAGCGG AAGAAGAGCT AGAGGCGCTT 
CAAGAAGAGA TGAGTGATGC CGGTGATCTT ATGGCTCCAA AGGCCTCAGA CAATTCTAAG 
AGCAAGGAGC AATAA 

 

Protein sequence

MEQTFFAKAG RITDAIEETL IAFFLGAMTL LTFANVIFRY VFNDNILWAL ELTVFMFAWM 
VLVGASYGVK KHFHIGVDVI INIVPEGKRK ALALFAAICC LAFSILLLIG SWNYWYPFAT 
DRAWYETDDI PMPEMLQFMA DWLNEGERYE KLPRFIPYFA LPLGMALLTL RFAQATWQIA 
TGKLDRLIAG HEAEEELEAL QEEMSDAGDL MAPKASDNSK SKEQ